STRINGSTRING
ALC57_11885 ALC57_11885 ALC57_11492 ALC57_11492 ALC57_10981 ALC57_10981 ALC57_10416 ALC57_10416 ALC57_10474 ALC57_10474 ALC57_10014 ALC57_10014 ALC57_10340 ALC57_10340 ALC57_10062 ALC57_10062 ALC57_09973 ALC57_09973 ALC57_09808 ALC57_09808 ALC57_09584 ALC57_09584 ALC57_09796 ALC57_09796 ALC57_09821 ALC57_09821 ALC57_09163 ALC57_09163 ALC57_09406 ALC57_09406 ALC57_09152 ALC57_09152 ALC57_09184 ALC57_09184 ALC57_08643 ALC57_08643 ALC57_08698 ALC57_08698 ALC57_08491 ALC57_08491 ALC57_08459 ALC57_08459 ALC57_08464 ALC57_08464 ALC57_07997 ALC57_07997 ALC57_08206 ALC57_08206 ALC57_08251 ALC57_08251 ALC57_08167 ALC57_08167 ALC57_07876 ALC57_07876 ALC57_07886 ALC57_07886 ALC57_07874 ALC57_07874 ALC57_07879 ALC57_07879 ALC57_08113 ALC57_08113 ALC57_07867 ALC57_07867 ALC57_07877 ALC57_07877 ALC57_07878 ALC57_07878 ALC57_07443 ALC57_07443 ALC57_07521 ALC57_07521 ALC57_07734 ALC57_07734 ALC57_07254 ALC57_07254 ALC57_07498 ALC57_07498 ALC57_06727 ALC57_06727 ALC57_06688 ALC57_06688 ALC57_06680 ALC57_06680 ALC57_06690 ALC57_06690 ALC57_06281 ALC57_06281 ALC57_06232 ALC57_06232 ALC57_05470 ALC57_05470 ALC57_04624 ALC57_04624 ALC57_03794 ALC57_03794 ALC57_03809 ALC57_03809 ALC57_04221 ALC57_04221 ALC57_03436 ALC57_03436 ALC57_03843 ALC57_03843 ALC57_03871 ALC57_03871 ALC57_03549 ALC57_03549 ALC57_03359 ALC57_03359 ALC57_03675 ALC57_03675 ALC57_03626 ALC57_03626 ALC57_02846 ALC57_02846 ALC57_02381 ALC57_02381 ALC57_02357 ALC57_02357 ALC57_02143 ALC57_02143 ALC57_02116 ALC57_02116 ALC57_01592 ALC57_01592 ALC57_01635 ALC57_01635 ALC57_01725 ALC57_01725 ALC57_01681 ALC57_01681 ALC57_01727 ALC57_01727 ALC57_01385 ALC57_01385 ALC57_00901 ALC57_00901 ALC57_00939 ALC57_00939 ALC57_00854 ALC57_00854 ALC57_00859 ALC57_00859 ALC57_15687 ALC57_15687 ALC57_18792 ALC57_18792 ALC57_18771 ALC57_18771 ALC57_18767 ALC57_18767 ALC57_18616 ALC57_18616 ALC57_18576 ALC57_18576 ALC57_18422 ALC57_18422 ALC57_18367 ALC57_18367 ALC57_18325 ALC57_18325 ALC57_18071 ALC57_18071 ALC57_18033 ALC57_18033 ALC57_18025 ALC57_18025 ALC57_17680 ALC57_17680 ALC57_17429 ALC57_17429 ALC57_15815 ALC57_15815 ALC57_15666 ALC57_15666 ALC57_03035 ALC57_03035 ALC57_01013 ALC57_01013 ALC57_00809 ALC57_00809 ALC57_00689 ALC57_00689 ALC57_00815 ALC57_00815 ALC57_00510 ALC57_00510 ALC57_00531 ALC57_00531 ALC57_00432 ALC57_00432 ALC57_00289 ALC57_00289 ALC57_18843 ALC57_18843 ALC57_18936 ALC57_18936 ALC57_19039 ALC57_19039 ALC57_18865 ALC57_18865 EIF6 EIF6 ALC57_12253 ALC57_12253 ALC57_12282 ALC57_12282 ALC57_12527 ALC57_12527 ALC57_12724 ALC57_12724 ALC57_12786 ALC57_12786 ALC57_12896 ALC57_12896 ALC57_13061 ALC57_13061 ALC57_13330 ALC57_13330 ALC57_14681 ALC57_14681 ALC57_14826 ALC57_14826 ALC57_15426 ALC57_15426 ALC57_15134 ALC57_15134 ALC57_15148 ALC57_15148 ALC57_15510 ALC57_15510 ALC57_17746 ALC57_17746 ALC57_17156 ALC57_17156 ALC57_17171 ALC57_17171 ALC57_17221 ALC57_17221 ALC57_17375 ALC57_17375 ALC57_17164 ALC57_17164 ALC57_16560 ALC57_16560 ALC57_16322 ALC57_16322 ALC57_16180 ALC57_16180 ALC57_16240 ALC57_16240 ALC57_16292 ALC57_16292 ALC57_16167 ALC57_16167 ALC57_15304 ALC57_15304 ALC57_15349 ALC57_15349 ALC57_14758 ALC57_14758 ALC57_13752 ALC57_13752 ALC57_13729 ALC57_13729 ALC57_12942 ALC57_12942 ALC57_12673 ALC57_12673 ALC57_12439 ALC57_12439 ALC57_12376 ALC57_12376 ALC57_12706 ALC57_12706 ALC57_05593 ALC57_05593 ALC57_05167 ALC57_05167 ALC57_05056 ALC57_05056 ALC57_04104 ALC57_04104 ALC57_04067 ALC57_04067 ALC57_03986 ALC57_03986 ALC57_03215 ALC57_03215 ALC57_03766 ALC57_03766 ALC57_03272 ALC57_03272 ALC57_02575 ALC57_02575 ALC57_12193 ALC57_12193 ALC57_12273 ALC57_12273 ALC57_11979 ALC57_11979 ALC57_12044 ALC57_12044 ALC57_11723 ALC57_11723 ALC57_11674 ALC57_11674 ALC57_11396 ALC57_11396 ALC57_11256 ALC57_11256 ALC57_10576 ALC57_10576 ALC57_10575 ALC57_10575 ALC57_10282 ALC57_10282 ALC57_10281 ALC57_10281 ALC57_09717 ALC57_09717 ALC57_09312 ALC57_09312 ALC57_09005 ALC57_09005 ALC57_08887 ALC57_08887 ALC57_08603 ALC57_08603 ALC57_08600 ALC57_08600 ALC57_08850 ALC57_08850 ALC57_07651 ALC57_07651 ALC57_07621 ALC57_07621 ALC57_06486 ALC57_06486 ALC57_06444 ALC57_06444 ALC57_06407 ALC57_06407 ALC57_06190 ALC57_06190 ALC57_06172 ALC57_06172 ALC57_06060 ALC57_06060 ALC57_05659 ALC57_05659 ALC57_05650 ALC57_05650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC57_11885Serine/threonine-protein kinase RIO3. (222 aa)
ALC57_11492MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein. (229 aa)
ALC57_10981Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (835 aa)
ALC57_10416Testis-expressed sequence 10 protein. (436 aa)
ALC57_10474ESF1 like protein. (762 aa)
ALC57_10014Methyltransferase-like protein 5. (211 aa)
ALC57_10340WD repeat-containing protein 36. (888 aa)
ALC57_10062RNA helicase. (561 aa)
ALC57_09973Putative ATP-dependent RNA helicase pitchoune; Belongs to the DEAD box helicase family. (465 aa)
ALC57_09808Protein LAS1 like protein. (655 aa)
ALC57_09584ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (777 aa)
ALC57_09796H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (190 aa)
ALC57_09821RNA-binding protein 34. (647 aa)
ALC57_09163WD repeat-containing protein 18. (422 aa)
ALC57_09406DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3828 aa)
ALC57_09152Putative ATP-dependent RNA helicase Dbp73D; Belongs to the DEAD box helicase family. (663 aa)
ALC57_09184U3 small nucleolar ribonucleoprotein. (367 aa)
ALC57_08643Ribosomal RNA processing protein 1 like protein. (666 aa)
ALC57_08698Serum response factor-binding protein 1. (404 aa)
ALC57_08491Ribosomal RNA processing protein 36 like protein. (235 aa)
ALC57_08459Something about silencing protein 10. (426 aa)
ALC57_08464Nucleolar protein 10. (1114 aa)
ALC57_07997Probable ribosome biogenesis protein ALC57_07997; Probable pre-rRNA processing protein involved in ribosome biogenesis. (268 aa)
ALC57_0820660S ribosomal protein L7a. (262 aa)
ALC57_08251Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5104 aa)
ALC57_08167Exosome complex exonuclease RRP42. (292 aa)
ALC57_07876Uncharacterized protein. (140 aa)
ALC57_07886Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (379 aa)
ALC57_07874Uncharacterized protein. (82 aa)
ALC57_07879Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (333 aa)
ALC57_08113Proline-, glutamic acid-and leucine-rich protein 1. (805 aa)
ALC57_07867Zinc finger CCHC domain-containing protein 4. (518 aa)
ALC57_07877Uncharacterized protein. (180 aa)
ALC57_07878RNA pseudouridylate synthase domain-containing protein 2. (512 aa)
ALC57_07443Cirhin. (687 aa)
ALC57_07521Putative RNA exonuclease NEF-sp. (682 aa)
ALC57_07734Protein MAK16 like protein A. (325 aa)
ALC57_07254UPF0431 protein C1orf66 like protein. (487 aa)
ALC57_07498rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (351 aa)
ALC57_06727Putative ribosome-binding factor A, mitochondrial. (295 aa)
ALC57_06688Serine/threonine-protein kinase RIO1. (549 aa)
ALC57_06680Peptidyl-prolyl cis-trans isomerase. (127 aa)
ALC57_06690RNA pseudouridylate synthase domain-containing protein 1. (276 aa)
ALC57_06281Exosome complex exonuclease RRP45. (389 aa)
ALC57_06232Zinc finger HIT domain-containing protein 3. (137 aa)
ALC57_05470Ribonuclease P protein subunit p29. (134 aa)
ALC57_04624Exosome complex exonuclease RRP43. (278 aa)
ALC57_03794rRNA-processing protein UTP23 like protein. (253 aa)
ALC57_03809ERI1 exoribonuclease 3. (224 aa)
ALC57_04221H/ACA ribonucleoprotein complex subunit 2-like protein. (150 aa)
ALC57_03436RRP15-like protein. (261 aa)
ALC57_03843U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (106 aa)
ALC57_03871RNA exonuclease 4. (259 aa)
ALC57_03549Putative ATP-dependent RNA helicase kurz. (1191 aa)
ALC57_03359Digestive organ expansion factor like protein. (644 aa)
ALC57_03675Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (811 aa)
ALC57_03626Putative ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family. (560 aa)
ALC57_02846Periodic tryptophan protein 1 like protein. (490 aa)
ALC57_02381Putative ribosomal RNA methyltransferase CG11447. (246 aa)
ALC57_02357GDP-fucose protein O-fucosyltransferase 2. (305 aa)
ALC57_02143Nucleolar protein 56. (553 aa)
ALC57_02116RNA pseudouridylate synthase domain-containing protein 4. (373 aa)
ALC57_01592RRP12-like protein. (1314 aa)
ALC57_01635Protein RRP5 like protein. (1326 aa)
ALC57_01725Protein KRI1 like protein. (803 aa)
ALC57_01681Activator of basal transcription 1. (231 aa)
ALC57_0172760S ribosomal protein L35. (122 aa)
ALC57_01385Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (182 aa)
ALC57_00901Serine/threonine-protein kinase RIO2. (515 aa)
ALC57_00939Putative methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (502 aa)
ALC57_00854RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1013 aa)
ALC57_00859U3 small nucleolar RNA-associated protein 15 like protein. (524 aa)
ALC57_15687Uncharacterized protein. (179 aa)
ALC57_18792U3 small nucleolar RNA-associated protein 14 like protein A. (828 aa)
ALC57_18771Uncharacterized protein F58A4.6. (270 aa)
ALC57_18767Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. (737 aa)
ALC57_18616Ribosomal RNA-processing protein 7 like protein A. (252 aa)
ALC57_18576Nucleolar pre-ribosomal-associated protein 1. (1963 aa)
ALC57_18422Uncharacterized protein. (355 aa)
ALC57_18367Probable ribosome biogenesis protein ALC57_18367; Probable pre-rRNA processing protein involved in ribosome biogenesis. (261 aa)
ALC57_18325Neuroguidin-A. (299 aa)
ALC57_18071Uncharacterized protein. (146 aa)
ALC57_18033Periodic tryptophan protein 2 like protein. (670 aa)
ALC57_1802539S ribosomal protein L44, mitochondrial. (316 aa)
ALC57_17680DDB1-and CUL4-associated factor 13. (444 aa)
ALC57_17429U3 small nucleolar RNA-associated protein 18 like protein. (528 aa)
ALC57_15815Ipi1_N domain-containing protein. (348 aa)
ALC57_15666U3 small nucleolar ribonucleoprotein. (312 aa)
ALC57_03035M-phase phosphoprotein 6. (150 aa)
ALC57_01013Ipi1_N domain-containing protein. (131 aa)
ALC57_00809Putative methyltransferase WBSCR22. (275 aa)
ALC57_00689Uncharacterized protein. (344 aa)
ALC57_00815Nuclear nucleic acid-binding protein C1D. (145 aa)
ALC57_00510U4/U6.U5 tri-snRNP-associated protein 1. (738 aa)
ALC57_00531PIH1 domain-containing protein 2. (644 aa)
ALC57_00432Pumilio domain-containing protein C14orf21. (609 aa)
ALC57_00289Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (323 aa)
ALC57_18843H/ACA ribonucleoprotein complex subunit 3. (65 aa)
ALC57_18936Uncharacterized protein. (161 aa)
ALC57_19039rRNA-processing protein FCF1 like protein. (213 aa)
ALC57_1886530S ribosomal protein S11, chloroplastic. (213 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (243 aa)
ALC57_12253Nucleolar protein 58. (543 aa)
ALC57_12282Box C/D snoRNA protein 1. (327 aa)
ALC57_12527Uncharacterized protein. (237 aa)
ALC57_12724Uncharacterized protein. (186 aa)
ALC57_12786Ribosome biogenesis protein NSA2 like protein. (259 aa)
ALC57_12896U3 small nucleolar RNA-interacting protein 2. (442 aa)
ALC57_13061Ipi1_N domain-containing protein. (206 aa)
ALC57_13330Ipi1_N domain-containing protein. (234 aa)
ALC57_14681U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (252 aa)
ALC57_14826Uncharacterized protein. (561 aa)
ALC57_15426Dimethyladenosine transferase 2, mitochondrial; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (446 aa)
ALC57_15134Ipi1_N domain-containing protein. (215 aa)
ALC57_15148Small subunit processome component 20 like protein. (2485 aa)
ALC57_15510RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (451 aa)
ALC57_17746rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (284 aa)
ALC57_17156tRNA methyltransferase 112 like protein. (124 aa)
ALC57_17171Exosome component 10. (1275 aa)
ALC57_17221Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (149 aa)
ALC57_17375Putative rRNA-processing protein EBP2 like protein. (317 aa)
ALC57_17164Pre-rRNA-processing protein TSR1 like protein. (785 aa)
ALC57_16560Cell growth-regulating nucleolar protein. (339 aa)
ALC57_16322Mucin-1. (711 aa)
ALC57_16180Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (428 aa)
ALC57_16240Transducin beta-like protein 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (1273 aa)
ALC57_16292UPF0184 protein C9orf16. (127 aa)
ALC57_16167Testis-expressed sequence 10 protein like protein. (552 aa)
ALC57_15304WD repeat-containing protein 46. (515 aa)
ALC57_15349Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
ALC57_14758RNA helicase. (758 aa)
ALC57_13752Superkiller viralicidic activity 2-like 2. (1009 aa)
ALC57_13729Putative ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (636 aa)
ALC57_12942Ribosome biogenesis protein BRX1 like protein. (344 aa)
ALC57_12673WD repeat-containing protein 43. (625 aa)
ALC57_12439Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (453 aa)
ALC57_12376Polynucleotide 5'-hydroxyl-kinase NOL9. (840 aa)
ALC57_12706Ribonucleases P/MRP protein subunit POP1. (867 aa)
ALC57_05593Uncharacterized protein. (140 aa)
ALC57_05167Nucleolar protein 14. (817 aa)
ALC57_05056WD_REPEATS_REGION domain-containing protein. (1769 aa)
ALC57_04104U3 small nucleolar RNA-associated protein 6 like protein. (607 aa)
ALC57_04067PIH1 domain-containing protein 1. (302 aa)
ALC57_03986Ipi1_N domain-containing protein. (186 aa)
ALC57_0321539S ribosomal protein L1, mitochondrial. (347 aa)
ALC57_03766Ipi1_N domain-containing protein. (213 aa)
ALC57_03272Ipi1_N domain-containing protein. (163 aa)
ALC57_02575HEAT repeat-containing protein 1. (2048 aa)
ALC57_12193Ipi1_N domain-containing protein. (150 aa)
ALC57_12273Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (714 aa)
ALC57_11979Ribosome biogenesis protein BMS1 like protein. (1101 aa)
ALC57_12044Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (341 aa)
ALC57_11723H/ACA ribonucleoprotein complex subunit 4. (532 aa)
ALC57_11674Ipi1_N domain-containing protein. (200 aa)
ALC57_11396Ipi1_N domain-containing protein. (262 aa)
ALC57_11256Ribonuclease 3. (1259 aa)
ALC57_10576Protein LTV1 like protein. (433 aa)
ALC57_10575Uncharacterized protein. (553 aa)
ALC57_10282General transcription factor 3C polypeptide 2. (1455 aa)
ALC57_1028160S ribosomal protein L7. (249 aa)
ALC57_09717Proliferation-associated protein 2G4. (386 aa)
ALC57_09312Suppressor of SWI4 1 like protein. (365 aa)
ALC57_09005WD repeat-containing protein 3. (925 aa)
ALC57_08887RNA-binding protein 40. (451 aa)
ALC57_08603Uncharacterized protein. (227 aa)
ALC57_08600U3 small nucleolar ribonucleoprotein. (211 aa)
ALC57_08850Exosome complex exonuclease RRP40. (244 aa)
ALC57_07651Ribonuclease P protein subunit p40. (163 aa)
ALC57_07621Putative ribosome production factor 1. (346 aa)
ALC57_06486KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
ALC57_06444Uncharacterized protein. (545 aa)
ALC57_06407Uncharacterized protein. (444 aa)
ALC57_06190Ipi1_N domain-containing protein. (210 aa)
ALC57_06172Ribosome production factor 2 like protein. (314 aa)
ALC57_06060Nucleolar protein 6. (1205 aa)
ALC57_05659rRNA 2'-O-methyltransferase fibrillarin. (310 aa)
ALC57_05650Bystin. (434 aa)
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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