56 items (Trachymyrmex cornetzi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_12376	Polynucleotide 5'-hydroxyl-kinase NOL9. (840 aa)
	ALC57_12942	Ribosome biogenesis protein BRX1 like protein. (344 aa)
	ALC57_15349	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
	ALC57_15980	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	ALC57_16038	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	ALC57_15984	WD repeat-containing protein 74. (334 aa)
	ALC57_16180	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (428 aa)
	ALC57_16322	Mucin-1. (711 aa)
	ALC57_17265	mTERF domain-containing protein 1, mitochondrial. (387 aa)
	ALC57_17375	Putative rRNA-processing protein EBP2 like protein. (317 aa)
	ALC57_17166	39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
	EIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (243 aa)
	ALC57_00289	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (323 aa)
	ALC57_00639	Uncharacterized protein. (372 aa)
	ALC57_00689	Uncharacterized protein. (344 aa)
	ALC57_01423	Nucleoplasmin-like protein. (179 aa)
	ALC57_02948	Protein SDA1 like protein. (1036 aa)
	ALC57_03215	39S ribosomal protein L1, mitochondrial. (347 aa)
	ALC57_04417	60S ribosomal protein L35a. (133 aa)
	ALC57_06172	Ribosome production factor 2 like protein. (314 aa)
	ALC57_07621	Putative ribosome production factor 1. (346 aa)
	ALC57_08620	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (280 aa)
	ALC57_08855	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (204 aa)
	ALC57_09312	Suppressor of SWI4 1 like protein. (365 aa)
	ALC57_10281	60S ribosomal protein L7. (249 aa)
	ALC57_10282	General transcription factor 3C polypeptide 2. (1455 aa)
	ALC57_10563	Putative ATP-dependent RNA helicase DDX28. (562 aa)
	ALC57_10900	Uncharacterized protein. (137 aa)
	ALC57_12044	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (341 aa)
	ALC57_12273	Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (714 aa)
	ALC57_12282	Box C/D snoRNA protein 1. (327 aa)
	ALC57_12288	Surfeit locus protein 6 like protein. (792 aa)
	ALC57_12786	Ribosome biogenesis protein NSA2 like protein. (259 aa)
	ALC57_15461	60S ribosomal protein L10. (219 aa)
	ALC57_16424	Nucleolar complex protein 2 like protein. (802 aa)
	ALC57_18576	Nucleolar pre-ribosomal-associated protein 1. (1963 aa)
	ALC57_04221	H/ACA ribonucleoprotein complex subunit 2-like protein. (150 aa)
	ALC57_11492	MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein. (229 aa)
	ALC57_03675	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (811 aa)
	ALC57_02381	Putative ribosomal RNA methyltransferase CG11447. (246 aa)
	ALC57_02357	GDP-fucose protein O-fucosyltransferase 2. (305 aa)
	ALC57_01902	Putative nucleolar GTP-binding protein 1. (558 aa)
	ALC57_01727	60S ribosomal protein L35. (122 aa)
	ALC57_09808	Protein LAS1 like protein. (655 aa)
	ALC57_09973	Putative ATP-dependent RNA helicase pitchoune; Belongs to the DEAD box helicase family. (465 aa)
	ALC57_10062	RNA helicase. (561 aa)
	ALC57_10017	Notchless protein like protein 1. (482 aa)
	ALC57_07734	Protein MAK16 like protein A. (325 aa)
	ALC57_06232	Zinc finger HIT domain-containing protein 3. (137 aa)
	ALC57_04732	Putative ribosome biogenesis protein RLP24. (173 aa)
	ALC57_04137	Nucleolar protein 16. (133 aa)
	ALC57_04286	Guanine nucleotide-binding protein-like 3 like protein. (569 aa)
	ALC57_08251	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5104 aa)
	ALC57_09972	60S ribosomal protein L6. (174 aa)
	ALC57_10981	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (835 aa)
	ALC57_08206	60S ribosomal protein L7a. (262 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_00289	ALC57_00639	A0A151JSQ6	A0A151JRH8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.916
ALC57_00289	ALC57_00689	A0A151JSQ6	A0A151JQY6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.996
ALC57_00289	ALC57_01727	A0A151JSQ6	A0A195ELK8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosomal protein L35.	0.999
ALC57_00289	ALC57_01902	A0A151JSQ6	A0A195EL85	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Putative nucleolar GTP-binding protein 1.	0.999
ALC57_00289	ALC57_02381	A0A151JSQ6	A0A195EJ81	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Putative ribosomal RNA methyltransferase CG11447.	0.860
ALC57_00289	ALC57_02948	A0A151JSQ6	A0A151JMU3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Protein SDA1 like protein.	0.993
ALC57_00289	ALC57_03215	A0A151JSQ6	A0A151JM45	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	39S ribosomal protein L1, mitochondrial.	0.998
ALC57_00289	ALC57_03675	A0A151JSQ6	A0A195EGR1	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.998
ALC57_00289	ALC57_04137	A0A151JSQ6	A0A195EEI9	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Nucleolar protein 16.	0.853
ALC57_00289	ALC57_04221	A0A151JSQ6	A0A195EEW6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	H/ACA ribonucleoprotein complex subunit 2-like protein.	0.997
ALC57_00289	ALC57_04286	A0A151JSQ6	A0A195EF32	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Guanine nucleotide-binding protein-like 3 like protein.	0.998
ALC57_00289	ALC57_04417	A0A151JSQ6	A0A151JCA3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosomal protein L35a.	0.996
ALC57_00289	ALC57_04732	A0A151JSQ6	A0A195EDM8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Putative ribosome biogenesis protein RLP24.	0.997
ALC57_00289	ALC57_06172	A0A151JSQ6	A0A151J8Z0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome production factor 2 like protein.	0.998
ALC57_00289	ALC57_07621	A0A151JSQ6	A0A151J863	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Putative ribosome production factor 1.	0.993
ALC57_00289	ALC57_07734	A0A151JSQ6	A0A195E532	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Protein MAK16 like protein A.	0.987
ALC57_00289	ALC57_08206	A0A151JSQ6	A0A195E3I2	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosomal protein L7a.	0.993
ALC57_00289	ALC57_08251	A0A151JSQ6	A0A195E3N5	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.	0.844
ALC57_00289	ALC57_08620	A0A151JSQ6	A0A151J6Q2	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.993
ALC57_00289	ALC57_08855	A0A151JSQ6	A0A151J6L2	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999