(8 nodes) Morphogenesis of an epithelial fold network (Trachymyrmex cornetzi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_18967	Myosin light chain kinase, smooth muscle; Belongs to the protein kinase superfamily. (284 aa)
	ALC57_01755	Homeobox protein cut. (1462 aa)
	ALC57_01749	Uncharacterized protein. (269 aa)
	ALC57_01751	Uncharacterized protein. (289 aa)
	ALC57_03878	Ras-like GTP-binding protein Rho1. (187 aa)
	ALC57_04227	Uncharacterized protein. (334 aa)
	ALC57_01981	Rho guanine nucleotide exchange factor 12. (1620 aa)
	ALC57_10366	Neurogenic locus Notch protein. (2446 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_01981	ALC57_03878	A0A151JPR7	A0A195EFA1	Rho guanine nucleotide exchange factor 12.	Ras-like GTP-binding protein Rho1.	0.994
ALC57_03878	ALC57_01981	A0A195EFA1	A0A151JPR7	Ras-like GTP-binding protein Rho1.	Rho guanine nucleotide exchange factor 12.	0.994
ALC57_03878	ALC57_10366	A0A195EFA1	A0A195DWW8	Ras-like GTP-binding protein Rho1.	Neurogenic locus Notch protein.	0.413
ALC57_03878	ALC57_18967	A0A195EFA1	A0A195D7Y4	Ras-like GTP-binding protein Rho1.	Myosin light chain kinase, smooth muscle; Belongs to the protein kinase superfamily.	0.764
ALC57_10366	ALC57_03878	A0A195DWW8	A0A195EFA1	Neurogenic locus Notch protein.	Ras-like GTP-binding protein Rho1.	0.413
ALC57_18967	ALC57_03878	A0A195D7Y4	A0A195EFA1	Myosin light chain kinase, smooth muscle; Belongs to the protein kinase superfamily.	Ras-like GTP-binding protein Rho1.	0.764