(16 nodes) Synaptic vesicle membrane network (Trachymyrmex cornetzi)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_13548	Synaptic vesicle glycoprotein 2B. (708 aa)
	ALC57_00906	Double C2-like domain-containing protein beta. (812 aa)
	ALC57_03886	Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (731 aa)
	ALC57_06674	Synaptic vesicle glycoprotein 2C. (503 aa)
	ALC57_08186	Synapsin. (343 aa)
	ALC57_08188	Synapsin. (333 aa)
	ALC57_08185	Uncharacterized protein. (278 aa)
	ALC57_11140	Vesicular inhibitory amino acid transporter. (536 aa)
	ALC57_16226	Kinesin-like protein KIF20A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1479 aa)
	ALC57_16227	Calcium channel flower. (230 aa)
	ALC57_03916	Syntaxin-6. (291 aa)
	ALC57_15622	Bcl-2-like protein 1. (323 aa)
	ALC57_15623	Synaptic vesicle glycoprotein 2B. (542 aa)
	ALC57_17608	Dopamine receptor 2; Belongs to the G-protein coupled receptor 1 family. (402 aa)
	ALC57_17970	Vesicular glutamate transporter 1. (2204 aa)
	ALC57_17969	Synaptotagmin 1. (439 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_03886	ALC57_15622	A0A195EG25	A0A151IWM6	Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Bcl-2-like protein 1.	0.904
ALC57_06674	ALC57_15623	A0A195E6G9	A0A151IWL9	Synaptic vesicle glycoprotein 2C.	Synaptic vesicle glycoprotein 2B.	0.713
ALC57_08185	ALC57_17969	A0A195E2M9	A0A151ISN2	Uncharacterized protein.	Synaptotagmin 1.	0.819
ALC57_08185	ALC57_17970	A0A195E2M9	A0A151ISV1	Uncharacterized protein.	Vesicular glutamate transporter 1.	0.438
ALC57_08186	ALC57_08188	A0A195E2W3	A0A195E2P8	Synapsin.	Synapsin.	0.934
ALC57_08186	ALC57_17969	A0A195E2W3	A0A151ISN2	Synapsin.	Synaptotagmin 1.	0.819
ALC57_08186	ALC57_17970	A0A195E2W3	A0A151ISV1	Synapsin.	Vesicular glutamate transporter 1.	0.438
ALC57_08188	ALC57_08186	A0A195E2P8	A0A195E2W3	Synapsin.	Synapsin.	0.934
ALC57_08188	ALC57_17969	A0A195E2P8	A0A151ISN2	Synapsin.	Synaptotagmin 1.	0.819
ALC57_08188	ALC57_17970	A0A195E2P8	A0A151ISV1	Synapsin.	Vesicular glutamate transporter 1.	0.438
ALC57_11140	ALC57_17969	A0A195DUW8	A0A151ISN2	Vesicular inhibitory amino acid transporter.	Synaptotagmin 1.	0.816
ALC57_11140	ALC57_17970	A0A195DUW8	A0A151ISV1	Vesicular inhibitory amino acid transporter.	Vesicular glutamate transporter 1.	0.753
ALC57_15622	ALC57_03886	A0A151IWM6	A0A195EG25	Bcl-2-like protein 1.	Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.904
ALC57_15623	ALC57_06674	A0A151IWL9	A0A195E6G9	Synaptic vesicle glycoprotein 2B.	Synaptic vesicle glycoprotein 2C.	0.713
ALC57_17969	ALC57_08185	A0A151ISN2	A0A195E2M9	Synaptotagmin 1.	Uncharacterized protein.	0.819
ALC57_17969	ALC57_08186	A0A151ISN2	A0A195E2W3	Synaptotagmin 1.	Synapsin.	0.819
ALC57_17969	ALC57_08188	A0A151ISN2	A0A195E2P8	Synaptotagmin 1.	Synapsin.	0.819
ALC57_17969	ALC57_11140	A0A151ISN2	A0A195DUW8	Synaptotagmin 1.	Vesicular inhibitory amino acid transporter.	0.816
ALC57_17969	ALC57_17970	A0A151ISN2	A0A151ISV1	Synaptotagmin 1.	Vesicular glutamate transporter 1.	0.771
ALC57_17970	ALC57_08185	A0A151ISV1	A0A195E2M9	Vesicular glutamate transporter 1.	Uncharacterized protein.	0.438