21 items (Trachymyrmex cornetzi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC57_18879	Putative 4-coumarate--CoA ligase 4. (589 aa)
	ALC57_00219	Disco-interacting protein 2. (2165 aa)
	ALC57_00078	4-coumarate--CoA ligase-like 6. (169 aa)
	ALC57_00782	Long-chain-fatty-acid--CoA ligase 3. (707 aa)
	ALC57_05500	Acetyl-coenzyme A synthetase. (664 aa)
	ALC57_09464	Luciferin 4-monooxygenase. (1441 aa)
	ALC57_09843	Acyl-CoA synthetase family member 4 like protein. (1012 aa)
	ALC57_03366	Luciferin 4-monooxygenase. (1741 aa)
	ALC57_02806	Acyl-CoA synthetase short-chain family member 3, mitochondrial. (628 aa)
	ALC57_01572	Long-chain fatty acid transport protein 1. (534 aa)
	ALC57_13053	4-coumarate--CoA ligase-like 7. (1109 aa)
	ALC57_13052	4-coumarate--CoA ligase-like 7. (518 aa)
	ALC57_06972	Long-chain fatty acid transport protein 1. (710 aa)
	ALC57_09147	Luciferin 4-monooxygenase. (638 aa)
	ALC57_14474	Tyrocidine synthase 3. (860 aa)
	ALC57_14473	Tyrocidine synthase 3. (751 aa)
	ALC57_16006	Luciferin 4-monooxygenase. (540 aa)
	ALC57_16730	Acyl-CoA synthetase family member 2, mitochondrial. (586 aa)
	ALC57_18668	Putative 4-coumarate--CoA ligase 3. (581 aa)
	ALC57_18670	Putative 4-coumarate--CoA ligase 3. (582 aa)
	ALC57_18878	Putative 4-coumarate--CoA ligase 4. (374 aa)

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_00078	ALC57_00782	A0A151K373	A0A151JQZ1	4-coumarate--CoA ligase-like 6.	Long-chain-fatty-acid--CoA ligase 3.	0.696
ALC57_00078	ALC57_02806	A0A151K373	A0A195EIL9	4-coumarate--CoA ligase-like 6.	Acyl-CoA synthetase short-chain family member 3, mitochondrial.	0.806
ALC57_00078	ALC57_05500	A0A151K373	A0A151JAV0	4-coumarate--CoA ligase-like 6.	Acetyl-coenzyme A synthetase.	0.806
ALC57_00078	ALC57_09843	A0A151K373	A0A151J5A5	4-coumarate--CoA ligase-like 6.	Acyl-CoA synthetase family member 4 like protein.	0.862
ALC57_00078	ALC57_13052	A0A151K373	A0A151J0A8	4-coumarate--CoA ligase-like 6.	4-coumarate--CoA ligase-like 7.	0.404
ALC57_00078	ALC57_14473	A0A151K373	A0A195DKQ3	4-coumarate--CoA ligase-like 6.	Tyrocidine synthase 3.	0.844
ALC57_00078	ALC57_14474	A0A151K373	A0A195DKT7	4-coumarate--CoA ligase-like 6.	Tyrocidine synthase 3.	0.842
ALC57_00078	ALC57_16006	A0A151K373	A0A195DG47	4-coumarate--CoA ligase-like 6.	Luciferin 4-monooxygenase.	0.584
ALC57_00219	ALC57_00782	A0A151JSG5	A0A151JQZ1	Disco-interacting protein 2.	Long-chain-fatty-acid--CoA ligase 3.	0.656
ALC57_00219	ALC57_02806	A0A151JSG5	A0A195EIL9	Disco-interacting protein 2.	Acyl-CoA synthetase short-chain family member 3, mitochondrial.	0.806
ALC57_00219	ALC57_05500	A0A151JSG5	A0A151JAV0	Disco-interacting protein 2.	Acetyl-coenzyme A synthetase.	0.806
ALC57_00219	ALC57_09843	A0A151JSG5	A0A151J5A5	Disco-interacting protein 2.	Acyl-CoA synthetase family member 4 like protein.	0.861
ALC57_00219	ALC57_14473	A0A151JSG5	A0A195DKQ3	Disco-interacting protein 2.	Tyrocidine synthase 3.	0.829
ALC57_00219	ALC57_14474	A0A151JSG5	A0A195DKT7	Disco-interacting protein 2.	Tyrocidine synthase 3.	0.829
ALC57_00782	ALC57_00078	A0A151JQZ1	A0A151K373	Long-chain-fatty-acid--CoA ligase 3.	4-coumarate--CoA ligase-like 6.	0.696
ALC57_00782	ALC57_00219	A0A151JQZ1	A0A151JSG5	Long-chain-fatty-acid--CoA ligase 3.	Disco-interacting protein 2.	0.656
ALC57_00782	ALC57_01572	A0A151JQZ1	A0A195EKY3	Long-chain-fatty-acid--CoA ligase 3.	Long-chain fatty acid transport protein 1.	0.502
ALC57_00782	ALC57_03366	A0A151JQZ1	A0A195EGK9	Long-chain-fatty-acid--CoA ligase 3.	Luciferin 4-monooxygenase.	0.660
ALC57_00782	ALC57_06972	A0A151JQZ1	A0A195E633	Long-chain-fatty-acid--CoA ligase 3.	Long-chain fatty acid transport protein 1.	0.502
ALC57_00782	ALC57_09147	A0A151JQZ1	A0A195E0J3	Long-chain-fatty-acid--CoA ligase 3.	Luciferin 4-monooxygenase.	0.706