STRINGSTRING
Tcur_0953 Tcur_0953 Tcur_0954 Tcur_0954 Tcur_0956 Tcur_0956 Tcur_0957 Tcur_0957 Tcur_0958 Tcur_0958 Tcur_0959 Tcur_0959 Tcur_0960 Tcur_0960 Tcur_1192 Tcur_1192 Tcur_4635 Tcur_4635 Tcur_4636 Tcur_4636 Tcur_4637 Tcur_4637
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tcur_0953PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pzu:PHZ_c0312 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (384 aa)
Tcur_0954PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_4364 TetR family transcriptional regulator. (213 aa)
Tcur_0956PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpa:RPA1710 putative acyl-CoA dehydrogenase. (408 aa)
Tcur_0957PFAM: homogentisate 12-dioxygenase; KEGG: pmy:Pmen_1697 homogentisate 1,2-dioxygenase. (373 aa)
Tcur_0958KEGG: cak:Caul_1118 alpha/beta hydrolase fold. (394 aa)
Tcur_0959PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_1780 acyl-CoA synthetase. (512 aa)
Tcur_0960PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: reu:Reut_A1568 acyl-CoA dehydrogenase, C- terminal. (377 aa)
Tcur_1192Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: rhi:NGR_c26230 putative citrate lyase; Belongs to the HpcH/HpaI aldolase family. (313 aa)
Tcur_4635PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: bpt:Bpet0851 acyl-CoA dehydrogenase. (386 aa)
Tcur_4636KEGG: bxe:Bxe_B2585 hypothetical protein. (280 aa)
Tcur_4637PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0464 putative dehydratase/racemase; Belongs to the CoA-transferase III family. (399 aa)
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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