STRINGSTRING
Bcav_0125 Bcav_0125 Bcav_0866 Bcav_0866 Bcav_0867 Bcav_0867 dapA dapA Bcav_0869 Bcav_0869 Bcav_0870 Bcav_0870 Bcav_0871 Bcav_0871 Bcav_0872 Bcav_0872 Bcav_0874 Bcav_0874 Bcav_0875 Bcav_0875 Bcav_0876 Bcav_0876 Bcav_0877 Bcav_0877 Bcav_0878 Bcav_0878 Bcav_0879 Bcav_0879 Bcav_1371 Bcav_1371 Bcav_1372 Bcav_1372 Bcav_1373 Bcav_1373 Bcav_1374 Bcav_1374 Bcav_1376 Bcav_1376 Bcav_1377 Bcav_1377 Bcav_1378 Bcav_1378 Bcav_1379 Bcav_1379 Bcav_1380 Bcav_1380 Bcav_1452 Bcav_1452 Bcav_1572 Bcav_1572 Bcav_2975 Bcav_2975 Bcav_2976 Bcav_2976 Bcav_2977 Bcav_2977 Bcav_2978 Bcav_2978 Bcav_2979 Bcav_2979 Bcav_2980 Bcav_2980 Bcav_2981 Bcav_2981 Bcav_2982 Bcav_2982 Bcav_2983 Bcav_2983 Bcav_3711 Bcav_3711 Bcav_3937 Bcav_3937 Bcav_3944 Bcav_3944
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bcav_0125SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region. (286 aa)
Bcav_08663,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase. (363 aa)
Bcav_0867PFAM: Aldehyde dehydrogenase family; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (319 aa)
Bcav_08695-carboxymethyl-2-hydroxymuconateDelta- isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; Demethylmenaquinone methyltransferase. (508 aa)
Bcav_0870PFAM: 4-hydroxyphenylacetate 3-hydroxylase family; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component. (485 aa)
Bcav_0871PFAM: Flavin reductase like domain. (175 aa)
Bcav_0872Transcriptional regulator, TrmB; PFAM: IclR helix-turn-helix domain. (242 aa)
Bcav_0874PFAM: MarR family. (158 aa)
Bcav_0875PFAM: Major Facilitator Superfamily. (441 aa)
Bcav_0876Conserved hypothetical protein. (103 aa)
Bcav_0877Rhs protein. (366 aa)
Bcav_0878PFAM: Ankyrin repeat. (173 aa)
Bcav_0879PFAM: Uncharacterized protein conserved in bacteria (DUF2185). (110 aa)
Bcav_1371Hypothetical protein. (182 aa)
Bcav_1372Hypothetical protein. (131 aa)
Bcav_1373Hypothetical protein. (161 aa)
Bcav_1374Putative serine-threonine protein kinase. (125 aa)
Bcav_1376Conserved hypothetical protein. (140 aa)
Bcav_1377LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (239 aa)
Bcav_1378PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370. (222 aa)
Bcav_1379Urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain. (282 aa)
Bcav_1380Conserved hypothetical protein. (164 aa)
Bcav_1452SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region. (291 aa)
Bcav_1572PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain. (240 aa)
Bcav_2975PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family. (310 aa)
Bcav_2976Hypothetical protein. (327 aa)
Bcav_2977PFAM: Bacterial extracellular solute-binding protein. (415 aa)
Bcav_2978PFAM: Binding-protein-dependent transport system inner membrane component. (289 aa)
Bcav_2979PFAM: Binding-protein-dependent transport system inner membrane component. (269 aa)
Bcav_2980D-aminoacylase domain protein; PFAM: Amidohydrolase family; D-aminoacylase, C-terminal region; Amidohydrolase family. (528 aa)
Bcav_2981PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain. (285 aa)
Bcav_2982PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative. (123 aa)
Bcav_2983D-amino acid deaminase. (414 aa)
Bcav_3711PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain. (257 aa)
Bcav_3937PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator. (267 aa)
Bcav_3944SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region. (312 aa)
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.