STRINGSTRING
Bcav_0735 Bcav_0735 Bcav_0867 Bcav_0867 Bcav_0869 Bcav_0869 Bcav_0870 Bcav_0870 Bcav_1896 Bcav_1896 hisC hisC Bcav_3164 Bcav_3164 Bcav_3663 Bcav_3663 pat pat
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bcav_0735PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (490 aa)
Bcav_0867PFAM: Aldehyde dehydrogenase family; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
Bcav_08695-carboxymethyl-2-hydroxymuconateDelta- isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; Demethylmenaquinone methyltransferase. (508 aa)
Bcav_0870PFAM: 4-hydroxyphenylacetate 3-hydroxylase family; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component. (485 aa)
Bcav_1896PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (525 aa)
hisCPFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (375 aa)
Bcav_3164PFAM: Aminotransferase class I and II. (460 aa)
Bcav_3663PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain. (348 aa)
patHistidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (357 aa)
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
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