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Dfer_0161 Dfer_0161 Dfer_0171 Dfer_0171 Dfer_0180 Dfer_0180 Dfer_0181 Dfer_0181 Dfer_0182 Dfer_0182 Dfer_0183 Dfer_0183 Dfer_0184 Dfer_0184 Dfer_0260 Dfer_0260 Dfer_0274 Dfer_0274 Dfer_0275 Dfer_0275 Dfer_0294 Dfer_0294 Dfer_0337 Dfer_0337 Dfer_0338 Dfer_0338 Dfer_0345 Dfer_0345 Dfer_0372 Dfer_0372 Dfer_0390 Dfer_0390 Dfer_0391 Dfer_0391 Dfer_0392 Dfer_0392 Dfer_0393 Dfer_0393 Dfer_0394 Dfer_0394 Dfer_0452 Dfer_0452 Dfer_0453 Dfer_0453 Dfer_0454 Dfer_0454 Dfer_0457 Dfer_0457 Dfer_0507 Dfer_0507 Dfer_0536 Dfer_0536 Dfer_0559 Dfer_0559 Dfer_0577 Dfer_0577 Dfer_0607 Dfer_0607 Dfer_0608 Dfer_0608 Dfer_0609 Dfer_0609 Dfer_0717 Dfer_0717 Dfer_0791 Dfer_0791 Dfer_0792 Dfer_0792 Dfer_0812 Dfer_0812 Dfer_0854 Dfer_0854 Dfer_0855 Dfer_0855 Dfer_0856 Dfer_0856 Dfer_0899 Dfer_0899 Dfer_0990 Dfer_0990 Dfer_1089 Dfer_1089 Dfer_1109 Dfer_1109 Dfer_1110 Dfer_1110 Dfer_1111 Dfer_1111 Dfer_1112 Dfer_1112 Dfer_1113 Dfer_1113 Dfer_1114 Dfer_1114 Dfer_1132 Dfer_1132 Dfer_1133 Dfer_1133 Dfer_1134 Dfer_1134 Dfer_1135 Dfer_1135 Dfer_1463 Dfer_1463 Dfer_1464 Dfer_1464 Dfer_1489 Dfer_1489 Dfer_1517 Dfer_1517 Dfer_1530 Dfer_1530 Dfer_1531 Dfer_1531 Dfer_1538 Dfer_1538 Dfer_1574 Dfer_1574 Dfer_1604 Dfer_1604 Dfer_1606 Dfer_1606 Dfer_1607 Dfer_1607 Dfer_1695 Dfer_1695 Dfer_1748 Dfer_1748 Dfer_1754 Dfer_1754 Dfer_1828 Dfer_1828 Dfer_1944 Dfer_1944 Dfer_1947 Dfer_1947 Dfer_2086 Dfer_2086 Dfer_2087 Dfer_2087 Dfer_2158 Dfer_2158 Dfer_2193 Dfer_2193 Dfer_2246 Dfer_2246 Dfer_2318 Dfer_2318 Dfer_2328 Dfer_2328 Dfer_2334 Dfer_2334 Dfer_2377 Dfer_2377 Dfer_2388 Dfer_2388 Dfer_2389 Dfer_2389 Dfer_2390 Dfer_2390 Dfer_2391 Dfer_2391 Dfer_2392 Dfer_2392 Dfer_2393 Dfer_2393 Dfer_2394 Dfer_2394 Dfer_2395 Dfer_2395 Dfer_2512 Dfer_2512 Dfer_2513 Dfer_2513 Dfer_2524 Dfer_2524 Dfer_2525 Dfer_2525 Dfer_2534 Dfer_2534 Dfer_2535 Dfer_2535 Dfer_2728 Dfer_2728 Dfer_2743 Dfer_2743 Dfer_2744 Dfer_2744 Dfer_2748 Dfer_2748 Dfer_2749 Dfer_2749 Dfer_2750 Dfer_2750 Dfer_2761 Dfer_2761 Dfer_2762 Dfer_2762 Dfer_3157 Dfer_3157 Dfer_3158 Dfer_3158 Dfer_3237 Dfer_3237 Dfer_3238 Dfer_3238 Dfer_3323 Dfer_3323 Dfer_3324 Dfer_3324 Dfer_3325 Dfer_3325 Dfer_3401 Dfer_3401 Dfer_3565 Dfer_3565 Dfer_3566 Dfer_3566 Dfer_3651 Dfer_3651 Dfer_4011 Dfer_4011 Dfer_4094 Dfer_4094 Dfer_5154 Dfer_5154 Dfer_5155 Dfer_5155 Dfer_5165 Dfer_5165 Dfer_5174 Dfer_5174 Dfer_5175 Dfer_5175 Dfer_5176 Dfer_5176 Dfer_5177 Dfer_5177 Dfer_5179 Dfer_5179 Dfer_5306 Dfer_5306 Dfer_5313 Dfer_5313 Dfer_5316 Dfer_5316 Dfer_5317 Dfer_5317 Dfer_5351 Dfer_5351 Dfer_5352 Dfer_5352 Dfer_5435 Dfer_5435 Dfer_5458 Dfer_5458 Dfer_5565 Dfer_5565 Dfer_5566 Dfer_5566 Dfer_5570 Dfer_5570 Dfer_5571 Dfer_5571 Dfer_5579 Dfer_5579 Dfer_5581 Dfer_5581 Dfer_5603 Dfer_5603 Dfer_5761 Dfer_5761
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Dfer_0161PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cts:Ctha_0392 response regulator receiver protein. (129 aa)
Dfer_0171KEGG: fjo:Fjoh_3925 GAF sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein. (868 aa)
Dfer_0180PFAM: acyltransferase 3; KEGG: bja:blr2367 putative acetyltransferase. (371 aa)
Dfer_0181Putative anti-sigma regulatory factor, serine/threonine protein kinase. (189 aa)
Dfer_0182PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: glo:Glov_2101 anti-sigma-factor antagonist. (112 aa)
Dfer_0183PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: vfm:VFMJ11_A1145 transcriptional regulator. (385 aa)
Dfer_0184Hypothetical protein. (179 aa)
Dfer_0260KEGG: gfo:GFO_0848 two-component system sensor histidine kinase/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein. (1287 aa)
Dfer_0274Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: fjo:Fjoh_3400 two component transcriptional regulator. (232 aa)
Dfer_0275Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: fjo:Fjoh_3399 integral membrane sensor signal transduction histidine kinase. (456 aa)
Dfer_0294KEGG: chu:CHU_1901 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAC repeat-containing protein. (799 aa)
Dfer_0337PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_3787 response regulator receiver protein. (126 aa)
Dfer_0338KEGG: chu:CHU_1663 sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (568 aa)
Dfer_0345Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvu:BVU_3986 two-component system sensor histidine kinase. (454 aa)
Dfer_0372PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nmu:Nmul_A2385 response regulator receiver domain-containing protein. (141 aa)
Dfer_0390PFAM: CheB methylesterase; KEGG: fjo:Fjoh_3351 CheB methylesterase. (193 aa)
Dfer_0391MCP methyltransferase, CheR-type; KEGG: fjo:Fjoh_3352 protein-glutamate O- methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type. (269 aa)
Dfer_0392PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_3353 response regulator receiver protein. (121 aa)
Dfer_0393Histidine kinase; KEGG: fjo:Fjoh_3354 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein. (1200 aa)
Dfer_0394PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_3355 response regulator receiver sensor signal transduction histidine kinase. (531 aa)
Dfer_0452Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bth:BT_0989 two-component system sensor histidine kinase. (460 aa)
Dfer_0453Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bfr:BF0209 two-component system response regulator. (225 aa)
Dfer_0454PFAM: 5 nucleotidase deoxy cytosolic type C; KEGG: bcl:ABC0323 5'(3')-deoxyribonucleotidase. (177 aa)
Dfer_0457KEGG: chu:CHU_2642 hypothetical protein. (241 aa)
Dfer_0507PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_1900 response regulator. (299 aa)
Dfer_0536Histidine kinase; PFAM: response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; ATP-binding region ATPase domain protein; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gfo:GFO_1697 two-component system sensor histidine kinase/response regulator hybrid. (1324 aa)
Dfer_0559Histidine kinase; PFAM: response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; ATP-binding region ATPase domain protein; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_2019 histidine kinase. (1327 aa)
Dfer_0577Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bfr:BF0209 two-component system response regulator. (231 aa)
Dfer_0607Hypothetical protein. (49 aa)
Dfer_0608Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: tbd:Tbd_1290 two component LuxR family transcriptional regulator. (209 aa)
Dfer_0609Histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator propeller; SMART: ATP-binding region ATPase domain protein; KEGG: sus:Acid_4777 histidine kinase. (1016 aa)
Dfer_0717Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: nis:NIS_1346 two-component sensor histidine kinase/response regulator. (396 aa)
Dfer_0791GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: psb:Psyr_3773 GAF:ATP-binding region, ATPase- like:histidine kinase A, N-terminal. (415 aa)
Dfer_0792Histidine kinase; KEGG: pdi:BDI_3101 two-component system sensor histidine kinase/response regulator, hybrid; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein. (1378 aa)
Dfer_0812Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gfo:GFO_1697 two-component system sensor histidine kinase/response regulator hybrid. (1335 aa)
Dfer_0854PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; serine/threonine protein kinase; GAF domain protein; KEGG: pth:PTH_0142 hypothetical protein. (1871 aa)
Dfer_0855Hpt protein; KEGG: cja:CJA_2461 probable sensor/response hybrid. (109 aa)
Dfer_0856Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pdi:BDI_2480 two-component response regulator. (233 aa)
Dfer_0899KEGG: fjo:Fjoh_4842 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein. (491 aa)
Dfer_0990KEGG: cps:CPS_3258 sensory box protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat- containing protein. (758 aa)
Dfer_1089PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aci:ACIAD3176 putative sensory transduction histidine kinase. (409 aa)
Dfer_1109PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_4476 metal dependent phosphohydrolase. (195 aa)
Dfer_1110PFAM: response regulator receiver; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: response regulator receiver; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mxa:MXAN_4049 serine/threonine protein kinase/response regulator/adenylate cyclase. (348 aa)
Dfer_1111PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cyt:cce_4659 two-component response regulator. (123 aa)
Dfer_1112Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: cyt:cce_1817 serine/threonine protein kinase and signal transduction histidine kinase. (453 aa)
Dfer_1113Hypothetical protein. (128 aa)
Dfer_1114KEGG: abc:ACICU_03464 hypothetical protein. (210 aa)
Dfer_1132KEGG: mgm:Mmc1_2114 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein. (647 aa)
Dfer_1133KEGG: ajs:Ajs_0649 CheB methylesterase. (194 aa)
Dfer_1134PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; KEGG: chu:CHU_2079 MCP methyltransferase, CheR-type. (271 aa)
Dfer_1135KEGG: chu:CHU_2080 sensor histidine kinase/response regulator fusion protein; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver. (1142 aa)
Dfer_1463KEGG: dge:Dgeo_2096 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein. (1118 aa)
Dfer_1464PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_2082 two-component response regulator, CheY-like. (134 aa)
Dfer_1489Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gfo:GFO_0036 two-component system sensor histidine kinase/response regulator hybrid. (1404 aa)
Dfer_1517PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pha:PSHAa2395 two-component response regulator. (136 aa)
Dfer_1530PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_3361 response regulator receiver protein. (133 aa)
Dfer_1531KEGG: cti:RALTA_B1342 two-component regulatory system protein; signal transduction histidine kinase ATPase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAC repeat-containing protein. (643 aa)
Dfer_1538PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_3767 response regulator receiver protein. (161 aa)
Dfer_1574Histidine kinase; KEGG: pdi:BDI_3101 two-component system sensor histidine kinase/response regulator, hybrid; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein. (1378 aa)
Dfer_1604Two component transcriptional regulator, AraC family; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; periplasmic binding protein/LacI transcriptional regulator; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: bvu:BVU_1666 putative two-component system sensor histidine kinase/response regulator, hybrid. (904 aa)
Dfer_1606Histidine kinase; PFAM: ATP-binding region ATPase domain protein; TPR repeat-containing protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide domain protein; KEGG: cts:Ctha_1885 histidine kinase. (710 aa)
Dfer_1607KEGG: fjo:Fjoh_2076 histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein. (1366 aa)
Dfer_1695Hypothetical protein; KEGG: amc:MADE_03505 possible biopolymer transport protein, ExbB family. (252 aa)
Dfer_1748KEGG: chu:CHU_1663 sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein. (550 aa)
Dfer_1754KEGG: fjo:Fjoh_3862 histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein. (1344 aa)
Dfer_1828PFAM: response regulator receiver; KEGG: chu:CHU_1220 CheY-like response regulator. (130 aa)
Dfer_1944Histidine kinase; PFAM: response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; ATP-binding region ATPase domain protein; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: bth:BT_4663 two-component system sensor histidine kinase/response. (1278 aa)
Dfer_1947Two component transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: fjo:Fjoh_3862 histidine kinase. (252 aa)
Dfer_2086Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bph:Bphy_1508 two component LuxR family transcriptional regulator. (220 aa)
Dfer_2087Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ots:OTBS_0907 PleC-like histidine kinase. (437 aa)
Dfer_2158GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: rlt:Rleg2_5176 GAF sensor signal transduction histidine kinase. (414 aa)
Dfer_2193Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bvu:BVU_2164 two-component system sensor histidine kinase/response regulator, hybrid. (1035 aa)
Dfer_2246Multi-sensor hybrid histidine kinase; KEGG: scl:sce0929 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold- 3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein. (1084 aa)
Dfer_2318Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein; KEGG: bth:BT_4663 two-component system sensor histidine kinase/response. (1298 aa)
Dfer_2328PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_1900 response regulator. (157 aa)
Dfer_2334Histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator propeller; SMART: ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_2076 histidine kinase. (1052 aa)
Dfer_2377PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_2317 OmpA/MotB family outer membrane protein. (295 aa)
Dfer_2388PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_2793 two-component response regulator. (154 aa)
Dfer_2389PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: chu:CHU_2794 hypothetical protein. (762 aa)
Dfer_2390KEGG: chu:CHU_2795 hypothetical protein. (230 aa)
Dfer_2391PFAM: Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: chu:CHU_2796 phosphoglycerate transport; protein for signal transmission. (726 aa)
Dfer_2392PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: chu:CHU_2879 PAS/PAC sensor signal transduction histidine kinase. (363 aa)
Dfer_2393PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_1955 response regulator receiver protein. (129 aa)
Dfer_2394Hypothetical protein. (62 aa)
Dfer_2395Hypothetical protein. (49 aa)
Dfer_2512KEGG: fjo:Fjoh_3360 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein. (798 aa)
Dfer_2513PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_1900 response regulator. (149 aa)
Dfer_2524PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_2793 two-component response regulator. (137 aa)
Dfer_2525KEGG: mac:MA2013 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein. (785 aa)
Dfer_2534PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gfo:GFO_1979 protein containing response regulator receiver domain. (141 aa)
Dfer_2535Putative PAS/PAC sensor protein; KEGG: gfo:GFO_1980 protein containing PAS domain; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (468 aa)
Dfer_2728Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: chu:CHU_1822 transcriptional regulator. (431 aa)
Dfer_2743Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bfr:BF0209 two-component system response regulator. (228 aa)
Dfer_2744Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bth:BT_0989 two-component system sensor histidine kinase. (455 aa)
Dfer_2748Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: ava:Ava_4753 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; PAS fold- 4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein. (476 aa)
Dfer_2749Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: fjo:Fjoh_0638 two component, sigma54 specific, Fis family transcriptional regulator. (486 aa)
Dfer_2750TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: chu:CHU_3177 RNA polymerase, sigma-54 factor. (480 aa)
Dfer_2761Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bth:BT_0989 two-component system sensor histidine kinase. (456 aa)
Dfer_2762Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family. (225 aa)
Dfer_3157PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: chu:CHU_2731 twp-component sensor histidine kinase. (407 aa)
Dfer_3158Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: chu:CHU_2732 two component transcriptional regulator. (225 aa)
Dfer_3237KEGG: cth:Cthe_1825 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver. (854 aa)
Dfer_3238Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gfo:GFO_3053 two-component system response regulator containing sigma-54 interaction domain. (457 aa)
Dfer_3323KEGG: ava:Ava_1559 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein. (445 aa)
Dfer_3324PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ana:all3766 two-component response regulator. (143 aa)
Dfer_3325KEGG: cts:Ctha_0019 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver. (667 aa)
Dfer_3401Histidine kinase; KEGG: chu:CHU_3041 two-component sensor histidine kinase, phosphate regulation; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (361 aa)
Dfer_3565Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: fjo:Fjoh_4969 integral membrane sensor signal transduction histidine kinase. (416 aa)
Dfer_3566Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: fjo:Fjoh_4970 two component transcriptional regulator. (228 aa)
Dfer_3651Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bfs:BF3634 two-component system, transcriptional regulatory protein. (228 aa)
Dfer_4011Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: chu:CHU_3042 two-component response regulator. (236 aa)
Dfer_4094Histidine kinase; KEGG: bvu:BVU_0016 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (612 aa)
Dfer_5154Hypothetical protein. (57 aa)
Dfer_5155PFAM: response regulator receiver; KEGG: dra:DR_2420 response regulator. (138 aa)
Dfer_5165PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: npu:Npun_R2902 response regulator receiver protein. (144 aa)
Dfer_5174PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pha:PSHAa2395 two-component response regulator. (135 aa)
Dfer_5175Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dac:Daci_5074 histidine kinase. (291 aa)
Dfer_5176MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; KEGG: reu:Reut_B4915 PAS; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase; PAS fold domain protein; PAS fold-4 domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; PAS domain containing protein. (1404 aa)
Dfer_5177PFAM: CheB methylesterase; KEGG: pna:Pnap_3575 CheB methylesterase. (345 aa)
Dfer_5179PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: fjo:Fjoh_3201 response regulator receiver protein. (292 aa)
Dfer_5306KEGG: cch:Cag_1091 hypothetical protein. (308 aa)
Dfer_5313Histidine kinase; KEGG: glo:Glov_0107 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein. (710 aa)
Dfer_5316Transcriptional regulator, Crp/Fnr family; PFAM: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; KEGG: chu:CHU_1132 transcriptional regulator. (354 aa)
Dfer_5317KEGG: gfo:GFO_1419 two-component system sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein. (421 aa)
Dfer_5351Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bth:BT_0733 two-component system sensor histidine kinase. (463 aa)
Dfer_5352Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pdi:BDI_0763 two-component system response regulator. (224 aa)
Dfer_5435Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dac:Daci_5074 histidine kinase. (455 aa)
Dfer_5458Putative two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: sat:SYN_02214 response regulator. (582 aa)
Dfer_5565PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gfo:GFO_3179 protein containing response regulator receiver domain. (137 aa)
Dfer_5566Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: chu:CHU_0103 sensor histidine kinase. (403 aa)
Dfer_5570PFAM: CheB methylesterase; KEGG: npu:Npun_BF231 CheB methylesterase. (351 aa)
Dfer_5571Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (1218 aa)
Dfer_5579PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pca:Pcar_2566 two component signal transduction response regulator. (157 aa)
Dfer_5581PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: chu:CHU_1900 response regulator. (289 aa)
Dfer_5603Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: noc:Noc_1167 signal transduction histidine kinase. (401 aa)
Dfer_5761KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; ATP- binding region ATPase domain protein. (1204 aa)
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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