STRINGSTRING
Dfer_0615 Dfer_0615 Dfer_0616 Dfer_0616 Dfer_0679 Dfer_0679 Dfer_0680 Dfer_0680 Dfer_0681 Dfer_0681 Dfer_0773 Dfer_0773 Dfer_0774 Dfer_0774 Dfer_1035 Dfer_1035 Dfer_1036 Dfer_1036 Dfer_1041 Dfer_1041 Dfer_1042 Dfer_1042 Dfer_1097 Dfer_1097 Dfer_1098 Dfer_1098 Dfer_1389 Dfer_1389 Dfer_1390 Dfer_1390 Dfer_1420 Dfer_1420 Dfer_1421 Dfer_1421 Dfer_1455 Dfer_1455 Dfer_1497 Dfer_1497 Dfer_1498 Dfer_1498 Dfer_1521 Dfer_1521 Dfer_1564 Dfer_1564 Dfer_1565 Dfer_1565 Dfer_1656 Dfer_1656 Dfer_1657 Dfer_1657 Dfer_1683 Dfer_1683 Dfer_1684 Dfer_1684 Dfer_1723 Dfer_1723 Dfer_1724 Dfer_1724 Dfer_1765 Dfer_1765 Dfer_1766 Dfer_1766 Dfer_1767 Dfer_1767 Dfer_1778 Dfer_1778 Dfer_1779 Dfer_1779 Dfer_1790 Dfer_1790 Dfer_1791 Dfer_1791 Dfer_2115 Dfer_2115 Dfer_2116 Dfer_2116 Dfer_2218 Dfer_2218 Dfer_2219 Dfer_2219 Dfer_2272 Dfer_2272 Dfer_2273 Dfer_2273 Dfer_2301 Dfer_2301 Dfer_2302 Dfer_2302 Dfer_2438 Dfer_2438 Dfer_2439 Dfer_2439 Dfer_2522 Dfer_2522 Dfer_2523 Dfer_2523 Dfer_3658 Dfer_3658 Dfer_4183 Dfer_4183 Dfer_4184 Dfer_4184 Dfer_4266 Dfer_4266 Dfer_4267 Dfer_4267 Dfer_4268 Dfer_4268 Dfer_4269 Dfer_4269 Dfer_4496 Dfer_4496 Dfer_4497 Dfer_4497 Dfer_4717 Dfer_4717 Dfer_4718 Dfer_4718 Dfer_4949 Dfer_4949 Dfer_4950 Dfer_4950 Dfer_4977 Dfer_4977 Dfer_4978 Dfer_4978 Dfer_5218 Dfer_5218 Dfer_5259 Dfer_5259 Dfer_5260 Dfer_5260 Dfer_5330 Dfer_5330 Dfer_5331 Dfer_5331
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dfer_0615PFAM: TonB-dependent receptor plug; KEGG: sru:SRU_2859 hypothetical protein. (1098 aa)
Dfer_0616KEGG: sru:SRU_2860 hypothetical protein. (570 aa)
Dfer_0679PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_0190 hypothetical protein. (1148 aa)
Dfer_0680PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2413 hypothetical protein. (477 aa)
Dfer_0681Hypothetical protein; KEGG: fjo:Fjoh_3115 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 28 family. (425 aa)
Dfer_0773PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_1712 hypothetical protein. (483 aa)
Dfer_0774PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_0190 hypothetical protein. (1181 aa)
Dfer_1035PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2413 hypothetical protein. (503 aa)
Dfer_1036PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_2412 hypothetical protein. (1081 aa)
Dfer_1041PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2413 hypothetical protein. (501 aa)
Dfer_1042PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_2412 hypothetical protein. (1058 aa)
Dfer_1097KEGG: sru:SRU_2860 hypothetical protein. (508 aa)
Dfer_1098PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sru:SRU_2859 hypothetical protein. (1105 aa)
Dfer_1389PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_1782 hypothetical protein. (583 aa)
Dfer_1390PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bvu:BVU_1781 hypothetical protein. (1037 aa)
Dfer_1420PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3127 hypothetical protein. (594 aa)
Dfer_1421PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pdi:BDI_3126 hypothetical protein. (1144 aa)
Dfer_1455PFAM: TonB-dependent receptor plug; KEGG: pdi:BDI_3473 putative TonB-dependent receptor. (814 aa)
Dfer_1497PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: bvu:BVU_1806 hypothetical protein. (1102 aa)
Dfer_1498PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_0364 hypothetical protein. (533 aa)
Dfer_1521PFAM: glycoside hydrolase family 2 sugar binding; coagulation factor 5/8 type domain protein; KEGG: nar:Saro_1727 glycoside hydrolase family protein. (1101 aa)
Dfer_1564PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_0601 hypothetical protein. (484 aa)
Dfer_1565PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: bfr:BF3437 hypothetical protein. (1142 aa)
Dfer_1656PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2413 hypothetical protein. (497 aa)
Dfer_1657PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_2412 hypothetical protein. (1122 aa)
Dfer_1683PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bfs:BF0661 putative outer membrane protein. (1045 aa)
Dfer_1684PFAM: RagB/SusD domain protein; KEGG: bfs:BF0662 hypothetical protein. (611 aa)
Dfer_1723PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_0190 hypothetical protein. (1071 aa)
Dfer_1724PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2413 hypothetical protein. (491 aa)
Dfer_1765PFAM: RagB/SusD domain protein; KEGG: fjo:Fjoh_4646 RagB/SusD domain-containing protein. (481 aa)
Dfer_1766PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_4194 TonB-dependent receptor. (1116 aa)
Dfer_1767PFAM: FecR protein; KEGG: fjo:Fjoh_3803 anti-FecI sigma factor, FecR. (398 aa)
Dfer_1778PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_0190 hypothetical protein. (1039 aa)
Dfer_1779PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3918 hypothetical protein. (485 aa)
Dfer_1790PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2468 hypothetical protein. (528 aa)
Dfer_1791PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pdi:BDI_2745 hypothetical protein. (1177 aa)
Dfer_2115PFAM: RagB/SusD domain protein; KEGG: fjo:Fjoh_4195 RagB/SusD domain-containing protein. (508 aa)
Dfer_2116PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_4194 TonB-dependent receptor. (1114 aa)
Dfer_2218PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_0510 hypothetical protein. (566 aa)
Dfer_2219PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bvu:BVU_0511 hypothetical protein. (1106 aa)
Dfer_2272PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_1921 hypothetical protein. (491 aa)
Dfer_2273PFAM: TonB-dependent receptor plug; KEGG: bfs:BF0501 putative outer membrane protein. (994 aa)
Dfer_2301PFAM: RagB/SusD domain protein; KEGG: fjo:Fjoh_4254 RagB/SusD domain-containing protein. (565 aa)
Dfer_2302PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bvu:BVU_0135 hypothetical protein. (1096 aa)
Dfer_2438PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: fjo:Fjoh_2043 TonB-dependent receptor, plug. (1129 aa)
Dfer_2439KEGG: fjo:Fjoh_2044 hypothetical protein. (525 aa)
Dfer_2522PFAM: RagB/SusD domain protein; KEGG: fjo:Fjoh_4646 RagB/SusD domain-containing protein. (522 aa)
Dfer_2523PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_4645 TonB-dependent receptor, plug. (1019 aa)
Dfer_3658TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bth:BT_3673 TonB. (489 aa)
Dfer_4183PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_1782 hypothetical protein. (610 aa)
Dfer_4184PFAM: TonB-dependent receptor plug; KEGG: bvu:BVU_1781 hypothetical protein. (1042 aa)
Dfer_4266PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3964 hypothetical protein. (527 aa)
Dfer_4267PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_3963 hypothetical protein. (1076 aa)
Dfer_4268PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3964 hypothetical protein. (503 aa)
Dfer_4269PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3963 hypothetical protein. (1038 aa)
Dfer_4496PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bfs:BF0571 putative TonB-linked outer membrane receptor protein. (1031 aa)
Dfer_4497PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_1676 hypothetical protein. (531 aa)
Dfer_4717PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_3963 hypothetical protein. (1155 aa)
Dfer_4718PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3964 hypothetical protein. (499 aa)
Dfer_4949PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_1517 hypothetical protein. (1062 aa)
Dfer_4950PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_3284 hypothetical protein. (592 aa)
Dfer_4977PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_2043 TonB-dependent receptor, plug. (1031 aa)
Dfer_4978KEGG: fjo:Fjoh_2044 hypothetical protein. (514 aa)
Dfer_5218KEGG: fjo:Fjoh_0125 hypothetical protein. (192 aa)
Dfer_5259PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_2333 hypothetical protein. (592 aa)
Dfer_5260PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_1517 hypothetical protein. (1060 aa)
Dfer_5330PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_1907 hypothetical protein. (1177 aa)
Dfer_5331PFAM: RagB/SusD domain protein; KEGG: pdi:BDI_1908 hypothetical protein. (541 aa)
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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