STRINGSTRING
Dfer_5543 Dfer_5543 Dfer_1697 Dfer_1697 Dfer_2056 Dfer_2056 Dfer_0725 Dfer_0725 Dfer_0721 Dfer_0721 Dfer_0415 Dfer_0415 Dfer_2962 Dfer_2962 Dfer_4503 Dfer_4503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dfer_5543PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_0560 histidine kinase. (637 aa)
Dfer_1697Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_0560 histidine kinase. (664 aa)
Dfer_2056PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: chu:CHU_1316 sensor histidine protein kinase. (475 aa)
Dfer_0725Histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain protein; Two component regulator propeller; KEGG: bth:BT_4663 two-component system sensor histidine kinase/response. (1036 aa)
Dfer_0721Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fjo:Fjoh_4738 histidine kinase. (989 aa)
Dfer_0415Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide domain protein; KEGG: gfo:GFO_2634 two-component system sensor histidine kinase. (600 aa)
Dfer_2962Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: chu:CHU_1316 sensor histidine protein kinase. (287 aa)
Dfer_4503Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; TPR repeat-containing protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide domain protein; KEGG: fjo:Fjoh_0560 histidine kinase. (643 aa)
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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