STRINGSTRING
Dfer_0080 Dfer_0080 Dfer_0098 Dfer_0098 Dfer_0101 Dfer_0101 Dfer_0143 Dfer_0143 Dfer_0279 Dfer_0279 Dfer_0303 Dfer_0303 Dfer_0311 Dfer_0311 Dfer_0333 Dfer_0333 Dfer_0386 Dfer_0386 Dfer_0403 Dfer_0403 Dfer_0564 Dfer_0564 Dfer_0692 Dfer_0692 Dfer_0728 Dfer_0728 Dfer_0759 Dfer_0759 Dfer_1014 Dfer_1014 Dfer_1034 Dfer_1034 Dfer_1040 Dfer_1040 Dfer_1198 Dfer_1198 Dfer_1334 Dfer_1334 Dfer_1373 Dfer_1373 Dfer_1378 Dfer_1378 Dfer_1484 Dfer_1484 Dfer_1545 Dfer_1545 Dfer_1593 Dfer_1593 Dfer_1595 Dfer_1595 Dfer_1611 Dfer_1611 Dfer_1616 Dfer_1616 Dfer_1787 Dfer_1787 Dfer_1978 Dfer_1978 Dfer_2188 Dfer_2188 Dfer_2203 Dfer_2203 Dfer_2442 Dfer_2442 Dfer_2443 Dfer_2443 Dfer_3060 Dfer_3060 Dfer_3236 Dfer_3236 Dfer_3243 Dfer_3243 Dfer_3348 Dfer_3348 Dfer_3388 Dfer_3388 Dfer_3473 Dfer_3473 Dfer_3477 Dfer_3477 Dfer_3610 Dfer_3610 Dfer_3699 Dfer_3699 Dfer_3702 Dfer_3702 Dfer_3707 Dfer_3707 Dfer_4177 Dfer_4177 Dfer_4536 Dfer_4536 Dfer_4620 Dfer_4620 Dfer_4806 Dfer_4806 Dfer_4957 Dfer_4957 Dfer_4984 Dfer_4984 Dfer_5054 Dfer_5054 Dfer_5206 Dfer_5206 Dfer_5275 Dfer_5275 Dfer_5289 Dfer_5289 Dfer_5322 Dfer_5322 Dfer_5323 Dfer_5323 Dfer_5332 Dfer_5332 Dfer_5340 Dfer_5340 Dfer_5388 Dfer_5388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dfer_0080KEGG: chu:CHU_2867 cytochrome c-related protein. (324 aa)
Dfer_0098PFAM: Di-haem cytochrome c peroxidase; KEGG: fjo:Fjoh_5007 cytochrome-c peroxidase. (365 aa)
Dfer_0101PFAM: Di-haem cytochrome c peroxidase; KEGG: chu:CHU_2275 cytochrome c peroxidase. (348 aa)
Dfer_0143TIGRFAM: heme-binding protein; KEGG: rba:RB24 L-sorbosone dehydrogenase. (880 aa)
Dfer_0279TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: rba:RB3919 signal peptide. (1286 aa)
Dfer_0303KEGG: npu:Npun_F6060 hypothetical protein. (518 aa)
Dfer_0311PFAM: Pyrrolo-quinoline quinone; cytochrome c class I; SMART: Pyrrolo-quinoline quinone; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone. (705 aa)
Dfer_0333PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; SMART: LamG domain protein jellyroll fold domain protein; KEGG: pat:Patl_0815 hypothetical protein. (1074 aa)
Dfer_0386PFAM: Di-haem cytochrome c peroxidase; KEGG: fjo:Fjoh_2477 cytochrome-c peroxidase. (431 aa)
Dfer_0403TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rba:RB3322 cytochrome c. (773 aa)
Dfer_0564PFAM: Di-haem cytochrome c peroxidase; KEGG: fps:FP0568 cytochrome c peroxidase. (607 aa)
Dfer_0692KEGG: sul:SYO3AOP1_0446 cytochrome c class I. (153 aa)
Dfer_0728KEGG: chu:CHU_2867 cytochrome c-related protein. (321 aa)
Dfer_0759KEGG: mxa:MXAN_1569 putative cytochrome c. (296 aa)
Dfer_1014Quinoprotein glucose dehydrogenase; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone; cytochrome c class I; SMART: Pyrrolo-quinoline quinone. (732 aa)
Dfer_1034TIGRFAM: heme-binding protein; KEGG: rba:RB24 L-sorbosone dehydrogenase. (898 aa)
Dfer_1040PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_3744 hypothetical protein. (768 aa)
Dfer_1198KEGG: lbf:LBF_3080 hypothetical protein. (292 aa)
Dfer_1334PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: pat:Patl_0815 hypothetical protein. (1068 aa)
Dfer_1373TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: rba:RB6964 L-sorbosone dehydrogenase. (1149 aa)
Dfer_1378Quinoprotein glucose dehydrogenase; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone; cytochrome c class I; SMART: Pyrrolo-quinoline quinone. (769 aa)
Dfer_1484PFAM: PKD domain containing protein; cytochrome c class I; SMART: PKD domain containing protein; KEGG: sgr:SGR_1113 hypothetical protein. (918 aa)
Dfer_1545PFAM: Di-haem cytochrome c peroxidase; KEGG: cps:CPS_1860 di-haem cytochrome c peroxidase. (384 aa)
Dfer_1593KEGG: pat:Patl_0817 hypothetical protein. (716 aa)
Dfer_1595PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_3952 hypothetical protein. (765 aa)
Dfer_1611Glycerol dehydrogenase (acceptor); KEGG: swi:Swit_1900 quinoprotein glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone. (722 aa)
Dfer_1616PFAM: cytochrome c class I; KEGG: chu:CHU_0560 sulfite oxidase cytochrome subunit. (171 aa)
Dfer_1787PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; KEGG: ote:Oter_2870 cytochrome c oxidase mono-heme subunit/FixO. (335 aa)
Dfer_1978PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: pat:Patl_0815 hypothetical protein. (772 aa)
Dfer_2188PFAM: cytochrome c class I; PKD domain containing protein; KEGG: sgr:SGR_924 hypothetical protein. (1151 aa)
Dfer_2203PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: pat:Patl_0815 hypothetical protein. (1091 aa)
Dfer_2442PFAM: NHL repeat containing protein; cytochrome c class I; KEGG: ote:Oter_0027 cytochrome c class I. (577 aa)
Dfer_2443PFAM: cytochrome c class I; KEGG: gbm:Gbem_0116 hypothetical protein. (143 aa)
Dfer_3060TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: rba:RB4621 signal peptide. (1027 aa)
Dfer_3236PFAM: cytochrome c class I; KEGG: rba:RB9438 large, multifunctional secreted protein. (647 aa)
Dfer_3243KEGG: pat:Patl_2873 hypothetical protein. (131 aa)
Dfer_3348KEGG: ote:Oter_0027 cytochrome c class I. (587 aa)
Dfer_3388PFAM: Di-haem cytochrome c peroxidase; KEGG: fps:FP0579 cytochrome c peroxidase. (373 aa)
Dfer_3473KEGG: mxa:MXAN_5554 cytochrome c family protein. (207 aa)
Dfer_3477PFAM: cytochrome c class I; KEGG: chu:CHU_2213 cytochrome c, mono- and diheme variant. (425 aa)
Dfer_3610Hypothetical protein; KEGG: sul:SYO3AOP1_0718 cytochrome c class I. (180 aa)
Dfer_3699KEGG: pat:Patl_0817 hypothetical protein. (503 aa)
Dfer_3702PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: rba:RB2693 hypothetical protein. (922 aa)
Dfer_3707TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: rba:RB4621 signal peptide. (968 aa)
Dfer_4177KEGG: ote:Oter_0487 hypothetical protein. (517 aa)
Dfer_4536TIGRFAM: heme-binding protein; KEGG: rba:RB5806 hypothetical protein. (168 aa)
Dfer_4620TIGRFAM: heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; HEAT domain containing protein; KEGG: rba:RB1988 glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor]. (1143 aa)
Dfer_4806PFAM: cytochrome c class I; KEGG: gfo:GFO_0813 C550-like class I cytochrome c. (136 aa)
Dfer_4957PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone. (698 aa)
Dfer_4984TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rba:RB8892 cytochrome c precursor. (1055 aa)
Dfer_5054PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; KEGG: sde:Sde_0722 transcriptional regulator, Crp/Fnr family. (1135 aa)
Dfer_5206PFAM: cytochrome c class I; KEGG: bte:BTH_II0881 mulitcopper oxidase domain- containing protein. (145 aa)
Dfer_5275KEGG: chu:CHU_2867 cytochrome c-related protein. (320 aa)
Dfer_5289PFAM: cytochrome c class I; KEGG: rba:RB9713 large, multifunctional secreted protein. (920 aa)
Dfer_5322PFAM: cytochrome c class I; KEGG: chu:CHU_1140 cytochrome c, mono- and diheme variant. (346 aa)
Dfer_5323TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; KEGG: chu:CHU_1138 cytochrome c oxidase, cbb3-type; Belongs to the heme-copper respiratory oxidase family. (701 aa)
Dfer_5332PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. (909 aa)
Dfer_5340PFAM: Di-haem cytochrome c peroxidase; KEGG: chu:CHU_2275 cytochrome c peroxidase. (377 aa)
Dfer_5388KEGG: ank:AnaeK_3055 putative lipoprotein. (202 aa)
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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