STRINGSTRING
Dfer_1282 Dfer_1282 Dfer_3109 Dfer_3109 Dfer_3233 Dfer_3233 Dfer_3278 Dfer_3278 Dfer_3315 Dfer_3315 Dfer_3424 Dfer_3424 Dfer_3438 Dfer_3438 Dfer_3569 Dfer_3569 Dfer_3882 Dfer_3882 Dfer_4100 Dfer_4100 Dfer_4298 Dfer_4298 Dfer_4401 Dfer_4401 Dfer_4568 Dfer_4568 Dfer_4648 Dfer_4648 Dfer_4749 Dfer_4749 Dfer_4805 Dfer_4805 Dfer_5072 Dfer_5072 Dfer_5196 Dfer_5196 Dfer_5296 Dfer_5296 Dfer_5304 Dfer_5304 Dfer_5341 Dfer_5341 Dfer_5346 Dfer_5346 Dfer_5364 Dfer_5364 Dfer_5669 Dfer_5669 Dfer_5774 Dfer_5774 Dfer_3037 Dfer_3037 Dfer_2514 Dfer_2514 Dfer_2239 Dfer_2239 Dfer_1761 Dfer_1761 Dfer_1729 Dfer_1729 Dfer_1669 Dfer_1669 Dfer_1518 Dfer_1518 Dfer_1467 Dfer_1467 Dfer_1455 Dfer_1455 Dfer_1453 Dfer_1453 Dfer_1428 Dfer_1428 Dfer_3052 Dfer_3052 Dfer_0975 Dfer_0975 Dfer_0558 Dfer_0558 Dfer_0102 Dfer_0102
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dfer_1282PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3668 putative TonB-dependent receptor. (852 aa)
Dfer_3109PFAM: TonB-dependent receptor; KEGG: pdi:BDI_0405 putative TonB-dependent outer membrane receptor protein. (745 aa)
Dfer_3233TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor. (907 aa)
Dfer_3278PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3668 putative TonB-dependent receptor. (973 aa)
Dfer_3315PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sru:SRU_2735 TonB-dependent receptor domain- containing protein. (650 aa)
Dfer_3424PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gfo:GFO_3050 TonB-dependent outer membrane receptor. (815 aa)
Dfer_3438PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bfs:BF3642 hypothetical protein. (772 aa)
Dfer_3569PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fps:FP0690 outer membrane protein precursor. (787 aa)
Dfer_3882PFAM: TonB-dependent receptor plug; KEGG: fjo:Fjoh_0821 TonB-dependent receptor. (1027 aa)
Dfer_4100PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bth:BT_2094 TonB-dependent receptor. (630 aa)
Dfer_4298TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_4039 TonB-dependent siderophore receptor. (824 aa)
Dfer_4401PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_1508 hypothetical protein. (923 aa)
Dfer_4568PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: chu:CHU_3709 outer membrane receptor protein. (776 aa)
Dfer_4648PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: lbf:LBF_3315 TonB-dependant outer membrane receptor. (653 aa)
Dfer_4749PFAM: TonB-dependent receptor plug; KEGG: bth:BT_2172 hypothetical protein. (806 aa)
Dfer_4805TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_3320 TonB-dependent siderophore receptor. (791 aa)
Dfer_5072KEGG: bth:BT_1185 OmpA-related protein. (1125 aa)
Dfer_5196PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3668 putative TonB-dependent receptor. (829 aa)
Dfer_5296KEGG: pdi:BDI_2527 hypothetical protein. (1071 aa)
Dfer_5304PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3668 putative TonB-dependent receptor. (812 aa)
Dfer_5341PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_3671 TonB-dependent outer membrane receptor. (657 aa)
Dfer_5346PFAM: TonB-dependent receptor plug; KEGG: fjo:Fjoh_3315 TonB-dependent receptor, plug. (763 aa)
Dfer_5364PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: paa:Paes_1274 TonB-dependent receptor plug. (729 aa)
Dfer_5669PFAM: TonB-dependent receptor plug; KEGG: bfr:BF3873 hypothetical protein. (789 aa)
Dfer_5774PFAM: TonB-dependent receptor plug; KEGG: chu:CHU_0733 TonB-dependent receptor. (690 aa)
Dfer_3037PFAM: TonB-dependent receptor; KEGG: gfo:GFO_2512 TonB-dependent outer membrane receptor. (736 aa)
Dfer_2514PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_4785 TonB-dependent receptor. (821 aa)
Dfer_2239TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_4039 TonB-dependent siderophore receptor. (789 aa)
Dfer_1761TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_2284 TonB-dependent siderophore receptor. (769 aa)
Dfer_1729TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fps:FP2456 TonB-dependent outer membrane ferrichrome-iron receptor precursor. (852 aa)
Dfer_1669PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_4071 TonB-dependent receptor. (823 aa)
Dfer_1518PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_1887 TonB-dependent receptor. (854 aa)
Dfer_1467PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pdi:BDI_3668 putative TonB-dependent receptor. (802 aa)
Dfer_1455PFAM: TonB-dependent receptor plug; KEGG: pdi:BDI_3473 putative TonB-dependent receptor. (814 aa)
Dfer_1453PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: chu:CHU_0259 TonB-linked outer membrane receptor. (798 aa)
Dfer_1428PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_4269 TonB-dependent receptor, plug. (791 aa)
Dfer_3052PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fjo:Fjoh_0928 TonB-dependent receptor, plug. (753 aa)
Dfer_0975TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fjo:Fjoh_2282 TonB-dependent siderophore receptor. (806 aa)
Dfer_0558PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: gfo:GFO_1311 TonB-dependent outer membrane receptor. (817 aa)
Dfer_0102TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cts:Ctha_1003 TonB-dependent siderophore receptor. (795 aa)
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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