STRINGSTRING
GCA_001743465_00245 GCA_001743465_00245 ssuB ssuB ssuC ssuC ssuD ssuD HA41_06550 HA41_06550 HA41_06545 HA41_06545 HA41_07410 HA41_07410 HA41_07405 HA41_07405 GCA_001743465_01886 GCA_001743465_01886 HA41_07395 HA41_07395 GCA_001743465_02684 GCA_001743465_02684 GCA_001743465_02685 GCA_001743465_02685 GCA_001743465_02686 GCA_001743465_02686
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001743465_00245Unannotated protein. (433 aa)
ssuBUnannotated protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (262 aa)
ssuCUnannotated protein. (263 aa)
ssuDUnannotated protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (381 aa)
HA41_06550Unannotated protein. (317 aa)
HA41_06545Unannotated protein. (183 aa)
HA41_07410Unannotated protein. (279 aa)
HA41_07405Unannotated protein. (275 aa)
GCA_001743465_01886Unannotated protein. (255 aa)
HA41_07395Unannotated protein. (326 aa)
GCA_001743465_02684Unannotated protein. (316 aa)
GCA_001743465_02685Unannotated protein. (284 aa)
GCA_001743465_02686Unannotated protein. (377 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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