STRINGSTRING
tyrA tyrA HA41_19105 HA41_19105 aroK-2 aroK-2 aroB aroB argD-2 argD-2 lpxP lpxP HA41_09755 HA41_09755 fumC fumC HA41_07730 HA41_07730 astE astE astB astB astD astD astA astA argD argD HA41_08220 HA41_08220 lpxL lpxL aroA aroA GCA_001743465_00472 GCA_001743465_00472 hutI hutI hutH hutH hutU hutU HA41_02440 HA41_02440 nadA nadA aroK aroK HA41_12285 HA41_12285 maeA maeA HA41_04205 HA41_04205 aroC aroC aroQ aroQ mdh mdh HA41_01665 HA41_01665 GCA_001743465_02193 GCA_001743465_02193 dapB dapB GCA_001743465_02285 GCA_001743465_02285 HA41_12850 HA41_12850 GCA_001743465_02545 GCA_001743465_02545 lpxM lpxM HA41_05845 HA41_05845 GCA_001743465_03079 GCA_001743465_03079 aroE aroE GCA_001743465_03144 GCA_001743465_03144 asd asd HA41_05485 HA41_05485 ppc ppc HA41_10660 HA41_10660 dapF dapF dapA dapA dapE dapE HA41_19665 HA41_19665 HA41_19765 HA41_19765 HA41_11250 HA41_11250 lysA lysA HA41_10835 HA41_10835 dapD dapD HA41_12295 HA41_12295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tyrAUnannotated protein. (373 aa)
HA41_19105Unannotated protein; Belongs to the aspartokinase family. (450 aa)
aroK-2Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (173 aa)
aroBUnannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (362 aa)
argD-2Unannotated protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (406 aa)
lpxPUnannotated protein; Catalyzes the transfer of palmitoleate from palmitoleoyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (palmitoleoyl)-lipid IV(A); Belongs to the LpxL/LpxM/LpxP family. LpxP subfamily. (307 aa)
HA41_09755Unannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (119 aa)
fumCUnannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (465 aa)
HA41_07730Unannotated protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (348 aa)
astEUnannotated protein; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. (331 aa)
astBUnannotated protein; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (442 aa)
astDUnannotated protein; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (489 aa)
astAUnannotated protein; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine. (343 aa)
argDUnannotated protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (406 aa)
HA41_08220Unannotated protein. (271 aa)
lpxLUnannotated protein; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (307 aa)
aroAUnannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (428 aa)
GCA_001743465_00472Unannotated protein. (499 aa)
hutIUnannotated protein. (405 aa)
hutHUnannotated protein. (519 aa)
hutUUnannotated protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (562 aa)
HA41_02440Unannotated protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (350 aa)
nadAUnannotated protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. (353 aa)
aroKUnannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (174 aa)
HA41_12285Unannotated protein. (387 aa)
maeAUnannotated protein. (565 aa)
HA41_04205Unannotated protein; Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10- formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives. (422 aa)
aroCUnannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (361 aa)
aroQUnannotated protein; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (150 aa)
mdhUnannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. (312 aa)
HA41_01665Unannotated protein. (161 aa)
GCA_001743465_02193Unannotated protein. (294 aa)
dapBUnannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (271 aa)
GCA_001743465_02285Unannotated protein. (820 aa)
HA41_12850Unannotated protein; Belongs to the DapA family. (298 aa)
GCA_001743465_02545Unannotated protein. (45 aa)
lpxMUnannotated protein; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. (324 aa)
HA41_05845Unannotated protein. (143 aa)
GCA_001743465_03079Unannotated protein. (1315 aa)
aroEUnannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (272 aa)
GCA_001743465_03144Unannotated protein. (180 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (369 aa)
HA41_05485Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. (811 aa)
ppcUnannotated protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (883 aa)
HA41_10660Unannotated protein. (201 aa)
dapFUnannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (274 aa)
dapAUnannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa)
dapEUnannotated protein; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (375 aa)
HA41_19665Unannotated protein. (523 aa)
HA41_19765Unannotated protein. (1843 aa)
HA41_11250Unannotated protein. (88 aa)
lysAUnannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (418 aa)
HA41_10835Unannotated protein. (443 aa)
dapDUnannotated protein; Belongs to the transferase hexapeptide repeat family. (274 aa)
HA41_12295Unannotated protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (359 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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