STRINGSTRING
GCA_001743465_02303 GCA_001743465_02303 HA41_06260 HA41_06260 HA41_03245 HA41_03245 HA41_03240 HA41_03240 HA41_10315 HA41_10315 GCA_001743465_02961 GCA_001743465_02961 HA41_09075 HA41_09075 HA41_18230 HA41_18230 tsgA tsgA HA41_05730 HA41_05730 GCA_001743465_03300 GCA_001743465_03300 GCA_001743465_03308 GCA_001743465_03308 HA41_10715 HA41_10715 fadA fadA aas aas lplT lplT fadE fadE HA41_09465 HA41_09465 fadI fadI GCA_001743465_04712 GCA_001743465_04712
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001743465_02303Unannotated protein. (441 aa)
HA41_06260Unannotated protein. (327 aa)
HA41_03245Unannotated protein; Belongs to the FAD-dependent oxidoreductase family. (381 aa)
HA41_03240Unannotated protein. (491 aa)
HA41_10315Unannotated protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (374 aa)
GCA_001743465_02961Unannotated protein. (569 aa)
HA41_09075Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (895 aa)
HA41_18230Unannotated protein. (412 aa)
tsgAUnannotated protein. (392 aa)
HA41_05730Unannotated protein. (339 aa)
GCA_001743465_03300Unannotated protein. (331 aa)
GCA_001743465_03308Unannotated protein. (369 aa)
HA41_10715Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (727 aa)
fadAUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
aasUnannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. (716 aa)
lplTUnannotated protein; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family. (396 aa)
fadEUnannotated protein. (817 aa)
HA41_09465Unannotated protein. (542 aa)
fadIUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa)
GCA_001743465_04712Unannotated protein. (698 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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