STRINGSTRING
argH argH argG argG GCA_001743465_03079 GCA_001743465_03079 HA41_08985 HA41_08985 GCA_001743465_02842 GCA_001743465_02842 gabD gabD GCA_001743465_02662 GCA_001743465_02662 GCA_001743465_02649 GCA_001743465_02649 GCA_001743465_02545 GCA_001743465_02545 GCA_001743465_02509 GCA_001743465_02509 HA41_00165 HA41_00165 carA carA carB carB GCA_001743465_01772 GCA_001743465_01772 HA41_12200 HA41_12200 HA41_08375 HA41_08375 GCA_001743465_01334 GCA_001743465_01334 GCA_001743465_01100 GCA_001743465_01100 HA41_18705 HA41_18705 GCA_001743465_00569 GCA_001743465_00569 HA41_01935 HA41_01935 asnB asnB HA41_03460 HA41_03460 HA41_08545 HA41_08545 gabD-2 gabD-2 purF purF HA41_04090 HA41_04090 pyrB pyrB pyrI pyrI HA41_19765 HA41_19765 purA purA HA41_19665 HA41_19665 HA41_04485 HA41_04485 glmS glmS HA41_08540 HA41_08540
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
argHUnannotated protein. (457 aa)
argGUnannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (405 aa)
GCA_001743465_03079Unannotated protein. (1315 aa)
HA41_08985Unannotated protein. (337 aa)
GCA_001743465_02842Unannotated protein. (71 aa)
gabDUnannotated protein; Belongs to the aldehyde dehydrogenase family. (485 aa)
GCA_001743465_02662Unannotated protein. (428 aa)
GCA_001743465_02649Unannotated protein. (534 aa)
GCA_001743465_02545Unannotated protein. (45 aa)
GCA_001743465_02509Unannotated protein. (230 aa)
HA41_00165Unannotated protein. (456 aa)
carAUnannotated protein; Belongs to the CarA family. (382 aa)
carBUnannotated protein; Belongs to the CarB family. (1075 aa)
GCA_001743465_01772Unannotated protein. (424 aa)
HA41_12200Unannotated protein. (469 aa)
HA41_08375Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (456 aa)
GCA_001743465_01334Unannotated protein. (306 aa)
GCA_001743465_01100Unannotated protein. (388 aa)
HA41_18705Unannotated protein; Belongs to the aldehyde dehydrogenase family. (457 aa)
GCA_001743465_00569Unannotated protein. (396 aa)
HA41_01935Unannotated protein. (319 aa)
asnBUnannotated protein. (555 aa)
HA41_03460Unannotated protein. (263 aa)
HA41_08545Unannotated protein. (386 aa)
gabD-2Unannotated protein; Belongs to the aldehyde dehydrogenase family. (483 aa)
purFUnannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (505 aa)
HA41_04090Unannotated protein. (405 aa)
pyrBUnannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)
pyrIUnannotated protein; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa)
HA41_19765Unannotated protein. (1843 aa)
purAUnannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (432 aa)
HA41_19665Unannotated protein. (523 aa)
HA41_04485Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate. (547 aa)
glmSUnannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (609 aa)
HA41_08540Unannotated protein. (255 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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