STRINGSTRING
HA41_02085 HA41_02085 HA41_06235 HA41_06235 HA41_19105 HA41_19105 GCA_001743465_02193 GCA_001743465_02193 dapB dapB GCA_001743465_02285 GCA_001743465_02285 asd asd HA41_05485 HA41_05485 dapA dapA HA41_19950 HA41_19950 cysD cysD cysN cysN HA41_04225 HA41_04225
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HA41_02085Unannotated protein. (172 aa)
HA41_06235Unannotated protein; Belongs to the DapA family. (297 aa)
HA41_19105Unannotated protein; Belongs to the aspartokinase family. (450 aa)
GCA_001743465_02193Unannotated protein. (294 aa)
dapBUnannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (271 aa)
GCA_001743465_02285Unannotated protein. (820 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (369 aa)
HA41_05485Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. (811 aa)
dapAUnannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa)
HA41_19950Unannotated protein. (75 aa)
cysDUnannotated protein. (302 aa)
cysNUnannotated protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (475 aa)
HA41_04225Unannotated protein; Belongs to the aspartate-semialdehyde dehydrogenase family. (335 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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