STRINGSTRING
HA41_06010 HA41_06010 HA41_10085 HA41_10085 fadI fadI GCA_001743465_04712 GCA_001743465_04712 HA41_11335 HA41_11335 GCA_001743465_03617 GCA_001743465_03617 HA41_04915 HA41_04915 fadA fadA HA41_10715 HA41_10715 fadR fadR HA41_18195 HA41_18195 GCA_001743465_02544 GCA_001743465_02544 GCA_001743465_02499 GCA_001743465_02499 GCA_001743465_02498 GCA_001743465_02498 GCA_001743465_02490 GCA_001743465_02490 GCA_001743465_02482 GCA_001743465_02482 GCA_001743465_02475 GCA_001743465_02475 GCA_001743465_02414 GCA_001743465_02414 HA41_12750 HA41_12750 HA41_01540 HA41_01540 rraA rraA GCA_001743465_01234 GCA_001743465_01234 GCA_001743465_01176 GCA_001743465_01176 HA41_02700 HA41_02700 HA41_06000 HA41_06000 HA41_06005 HA41_06005 GCA_001743465_01032 GCA_001743465_01032 HA41_03840 HA41_03840 HA41_16245 HA41_16245
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HA41_06010Unannotated protein. (362 aa)
HA41_10085Unannotated protein. (258 aa)
fadIUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa)
GCA_001743465_04712Unannotated protein. (698 aa)
HA41_11335Unannotated protein. (264 aa)
GCA_001743465_03617Unannotated protein. (130 aa)
HA41_04915Unannotated protein. (232 aa)
fadAUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
HA41_10715Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (727 aa)
fadRUnannotated protein; Multifunctional regulator of fatty acid metabolism. (239 aa)
HA41_18195Unannotated protein. (253 aa)
GCA_001743465_02544Unannotated protein. (101 aa)
GCA_001743465_02499Unannotated protein. (129 aa)
GCA_001743465_02498Unannotated protein. (101 aa)
GCA_001743465_02490Unannotated protein. (248 aa)
GCA_001743465_02482Unannotated protein. (76 aa)
GCA_001743465_02475Unannotated protein. (229 aa)
GCA_001743465_02414Unannotated protein. (134 aa)
HA41_12750Unannotated protein. (129 aa)
HA41_01540Unannotated protein. (254 aa)
rraAUnannotated protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome. (196 aa)
GCA_001743465_01234Unannotated protein. (227 aa)
GCA_001743465_01176Unannotated protein. (151 aa)
HA41_02700Unannotated protein. (327 aa)
HA41_06000Unannotated protein. (245 aa)
HA41_06005Unannotated protein. (240 aa)
GCA_001743465_01032Unannotated protein. (322 aa)
HA41_03840Unannotated protein. (134 aa)
HA41_16245Unannotated protein. (257 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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