STRINGSTRING
GCA_001743465_04712 GCA_001743465_04712 HA41_12605 HA41_12605 HA41_12600 HA41_12600 HA41_16900 HA41_16900 HA41_00845 HA41_00845 HA41_15105 HA41_15105 GCA_001743465_00653 GCA_001743465_00653 mgsA mgsA sucC sucC HA41_06705 HA41_06705 sucD sucD HA41_08475 HA41_08475 HA41_07130 HA41_07130 GCA_001743465_00244 GCA_001743465_00244 HA41_14650 HA41_14650 HA41_14655 HA41_14655 HA41_13285 HA41_13285 HA41_05930 HA41_05930 GCA_001743465_02662 GCA_001743465_02662 HA41_18590 HA41_18590 HA41_01555 HA41_01555 HA41_01570 HA41_01570 accA accA acs acs GCA_001743465_01941 GCA_001743465_01941 GCA_001743465_03365 GCA_001743465_03365 HA41_10715 HA41_10715 GCA_001743465_03530 GCA_001743465_03530 HA41_16010 HA41_16010 GCA_001743465_03735 GCA_001743465_03735 grcA grcA HA41_17725 HA41_17725 ackA ackA HA41_04125 HA41_04125 GCA_001743465_04687 GCA_001743465_04687
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001743465_04712Unannotated protein. (698 aa)
HA41_12605Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
HA41_12600Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (153 aa)
HA41_16900Unannotated protein. (307 aa)
HA41_00845Unannotated protein. (356 aa)
HA41_15105Unannotated protein. (501 aa)
GCA_001743465_00653Unannotated protein. (439 aa)
mgsAUnannotated protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (166 aa)
sucCUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
HA41_06705Unannotated protein. (760 aa)
sucDUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (291 aa)
HA41_08475Unannotated protein. (127 aa)
HA41_07130Unannotated protein. (368 aa)
GCA_001743465_00244Unannotated protein. (356 aa)
HA41_14650Unannotated protein. (277 aa)
HA41_14655Unannotated protein. (266 aa)
HA41_13285Unannotated protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (425 aa)
HA41_05930Unannotated protein. (365 aa)
GCA_001743465_02662Unannotated protein. (428 aa)
HA41_18590Unannotated protein. (885 aa)
HA41_01555Unannotated protein. (474 aa)
HA41_01570Unannotated protein; Belongs to the aconitase/IPM isomerase family. (865 aa)
accAUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (318 aa)
acsUnannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. Enables the cell to use acetate during aerobic growth to generate energy via the TCA cycle, and biosynthetic compounds via the glyoxylate shunt. Acetylates [...] (651 aa)
GCA_001743465_01941Unannotated protein. (112 aa)
GCA_001743465_03365Unannotated protein. (561 aa)
HA41_10715Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (727 aa)
GCA_001743465_03530Unannotated protein. (424 aa)
HA41_16010Unannotated protein. (274 aa)
GCA_001743465_03735Unannotated protein. (340 aa)
grcAUnannotated protein; Acts as a radical domain for damaged PFL and possibly other radical proteins. (127 aa)
HA41_17725Unannotated protein. (327 aa)
ackAUnannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
HA41_04125Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (714 aa)
GCA_001743465_04687Unannotated protein. (304 aa)
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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