(5 nodes) Mixed, incl. Endothelial cell morphogenesis, and Kringle domain network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000004184	annotation not available (282 aa)
	ENSNMLP00000007467	annotation not available (350 aa)
	ENSNMLP00000021019	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a. (613 aa)
	ENSNMLP00000024480	Receptor-interacting serine-threonine kinase 4. (800 aa)
	ENSNMLP00000032461	annotation not available (569 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000004184	ENSNMLP00000007467	annotation not available	annotation not available	0.948
ENSNMLP00000004184	ENSNMLP00000021019	annotation not available	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.858
ENSNMLP00000004184	ENSNMLP00000024480	annotation not available	Receptor-interacting serine-threonine kinase 4.	0.927
ENSNMLP00000004184	ENSNMLP00000032461	annotation not available	annotation not available	0.620
ENSNMLP00000007467	ENSNMLP00000004184	annotation not available	annotation not available	0.948
ENSNMLP00000007467	ENSNMLP00000021019	annotation not available	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.889
ENSNMLP00000007467	ENSNMLP00000024480	annotation not available	Receptor-interacting serine-threonine kinase 4.	0.954
ENSNMLP00000007467	ENSNMLP00000032461	annotation not available	annotation not available	0.962
ENSNMLP00000021019	ENSNMLP00000004184	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	annotation not available	0.858
ENSNMLP00000021019	ENSNMLP00000007467	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	annotation not available	0.889
ENSNMLP00000021019	ENSNMLP00000024480	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	Receptor-interacting serine-threonine kinase 4.	0.865
ENSNMLP00000021019	ENSNMLP00000032461	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	annotation not available	0.835
ENSNMLP00000024480	ENSNMLP00000004184	Receptor-interacting serine-threonine kinase 4.	annotation not available	0.927
ENSNMLP00000024480	ENSNMLP00000007467	Receptor-interacting serine-threonine kinase 4.	annotation not available	0.954
ENSNMLP00000024480	ENSNMLP00000021019	Receptor-interacting serine-threonine kinase 4.	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.865
ENSNMLP00000024480	ENSNMLP00000032461	Receptor-interacting serine-threonine kinase 4.	annotation not available	0.852
ENSNMLP00000032461	ENSNMLP00000004184	annotation not available	annotation not available	0.620
ENSNMLP00000032461	ENSNMLP00000007467	annotation not available	annotation not available	0.962
ENSNMLP00000032461	ENSNMLP00000021019	annotation not available	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.835
ENSNMLP00000032461	ENSNMLP00000024480	annotation not available	Receptor-interacting serine-threonine kinase 4.	0.852