(5 nodes) Keratan sulfate degradation, and Extracellular matrix network (Neogobius melanostomus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000013823	Proline/arginine-rich end leucine-rich repeat protein. (372 aa)
	ENSNMLP00000018936	Biglycan b. (369 aa)
	ENSNMLP00000026585	Asporin (LRR class 1). (333 aa)
	ENSNMLP00000031754	Keratocan. (323 aa)
	ENSNMLP00000032684	Osteoglycin, paralog a. (278 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000013823	ENSNMLP00000018936	Proline/arginine-rich end leucine-rich repeat protein.	Biglycan b.	0.687
ENSNMLP00000013823	ENSNMLP00000026585	Proline/arginine-rich end leucine-rich repeat protein.	Asporin (LRR class 1).	0.705
ENSNMLP00000013823	ENSNMLP00000031754	Proline/arginine-rich end leucine-rich repeat protein.	Keratocan.	0.645
ENSNMLP00000013823	ENSNMLP00000032684	Proline/arginine-rich end leucine-rich repeat protein.	Osteoglycin, paralog a.	0.730
ENSNMLP00000018936	ENSNMLP00000013823	Biglycan b.	Proline/arginine-rich end leucine-rich repeat protein.	0.687
ENSNMLP00000018936	ENSNMLP00000031754	Biglycan b.	Keratocan.	0.675
ENSNMLP00000018936	ENSNMLP00000032684	Biglycan b.	Osteoglycin, paralog a.	0.796
ENSNMLP00000026585	ENSNMLP00000013823	Asporin (LRR class 1).	Proline/arginine-rich end leucine-rich repeat protein.	0.705
ENSNMLP00000026585	ENSNMLP00000031754	Asporin (LRR class 1).	Keratocan.	0.692
ENSNMLP00000026585	ENSNMLP00000032684	Asporin (LRR class 1).	Osteoglycin, paralog a.	0.801
ENSNMLP00000031754	ENSNMLP00000013823	Keratocan.	Proline/arginine-rich end leucine-rich repeat protein.	0.645
ENSNMLP00000031754	ENSNMLP00000018936	Keratocan.	Biglycan b.	0.675
ENSNMLP00000031754	ENSNMLP00000026585	Keratocan.	Asporin (LRR class 1).	0.692
ENSNMLP00000031754	ENSNMLP00000032684	Keratocan.	Osteoglycin, paralog a.	0.778
ENSNMLP00000032684	ENSNMLP00000013823	Osteoglycin, paralog a.	Proline/arginine-rich end leucine-rich repeat protein.	0.730
ENSNMLP00000032684	ENSNMLP00000018936	Osteoglycin, paralog a.	Biglycan b.	0.796
ENSNMLP00000032684	ENSNMLP00000026585	Osteoglycin, paralog a.	Asporin (LRR class 1).	0.801
ENSNMLP00000032684	ENSNMLP00000031754	Osteoglycin, paralog a.	Keratocan.	0.778