(16 nodes) Organellar large ribosomal subunit network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000002192	Mitochondrial ribosomal protein L47. (257 aa)
	ENSNMLP00000007564	Mitochondrial ribosomal protein L51. (128 aa)
	ENSNMLP00000007687	annotation not available (184 aa)
	ENSNMLP00000009840	Mitochondrial ribosomal protein L43. (151 aa)
	ENSNMLP00000011469	Mitochondrial ribosomal protein L48. (209 aa)
	ENSNMLP00000013072	Mitochondrial ribosomal protein L34. (122 aa)
	ENSNMLP00000014137	Mitochondrial ribosomal protein L35. (177 aa)
	ENSNMLP00000015129	Mitochondrial ribosomal protein L54. (138 aa)
	ENSNMLP00000015267	Mitochondrial ribosomal protein L40. (202 aa)
	ENSNMLP00000015747	annotation not available (126 aa)
	ENSNMLP00000021456	Mitochondrial ribosomal protein L46. (298 aa)
	ENSNMLP00000026901	Mitochondrial ribosomal protein L45. (306 aa)
	ENSNMLP00000030394	Mitochondrial ribosomal protein L18. (183 aa)
	ENSNMLP00000033135	Mitochondrial ribosomal protein L30. (157 aa)
	ENSNMLP00000033287	Mitochondrial ribosomal protein L52. (129 aa)
	ENSNMLP00000037647	Mitochondrial ribosomal protein L23. (159 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000002192	ENSNMLP00000007564	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L51.	0.944
ENSNMLP00000002192	ENSNMLP00000007687	Mitochondrial ribosomal protein L47.	annotation not available	0.989
ENSNMLP00000002192	ENSNMLP00000009840	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L43.	0.986
ENSNMLP00000002192	ENSNMLP00000011469	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L48.	0.933
ENSNMLP00000002192	ENSNMLP00000013072	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L34.	0.985
ENSNMLP00000002192	ENSNMLP00000014137	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L35.	0.933
ENSNMLP00000002192	ENSNMLP00000015129	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L54.	0.969
ENSNMLP00000002192	ENSNMLP00000015267	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L40.	0.992
ENSNMLP00000002192	ENSNMLP00000015747	Mitochondrial ribosomal protein L47.	annotation not available	0.947
ENSNMLP00000002192	ENSNMLP00000021456	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L46.	0.996
ENSNMLP00000002192	ENSNMLP00000026901	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L45.	0.959
ENSNMLP00000002192	ENSNMLP00000030394	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L18.	0.939
ENSNMLP00000002192	ENSNMLP00000033135	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L30.	0.996
ENSNMLP00000002192	ENSNMLP00000033287	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L52.	0.920
ENSNMLP00000002192	ENSNMLP00000037647	Mitochondrial ribosomal protein L47.	Mitochondrial ribosomal protein L23.	0.998
ENSNMLP00000007564	ENSNMLP00000002192	Mitochondrial ribosomal protein L51.	Mitochondrial ribosomal protein L47.	0.944
ENSNMLP00000007564	ENSNMLP00000007687	Mitochondrial ribosomal protein L51.	annotation not available	0.968
ENSNMLP00000007564	ENSNMLP00000009840	Mitochondrial ribosomal protein L51.	Mitochondrial ribosomal protein L43.	0.954
ENSNMLP00000007564	ENSNMLP00000011469	Mitochondrial ribosomal protein L51.	Mitochondrial ribosomal protein L48.	0.965
ENSNMLP00000007564	ENSNMLP00000013072	Mitochondrial ribosomal protein L51.	Mitochondrial ribosomal protein L34.	0.904