(5 nodes) Mixed, incl. Ribosomal protein L13, and Ribosomal protein L3 network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000010706	Mitochondrial ribosomal protein L3. (350 aa)
	ENSNMLP00000016657	Mitochondrial ribosomal protein L22. (250 aa)
	ENSNMLP00000025662	Mitochondrial ribosomal protein L27. (147 aa)
	ENSNMLP00000032742	Mitochondrial ribosomal protein L13. (180 aa)
	ENSNMLP00000043013	Mitochondrial ribosomal protein S6. (116 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000010706	ENSNMLP00000016657	Mitochondrial ribosomal protein L3.	Mitochondrial ribosomal protein L22.	0.999
ENSNMLP00000010706	ENSNMLP00000025662	Mitochondrial ribosomal protein L3.	Mitochondrial ribosomal protein L27.	0.998
ENSNMLP00000010706	ENSNMLP00000032742	Mitochondrial ribosomal protein L3.	Mitochondrial ribosomal protein L13.	0.999
ENSNMLP00000010706	ENSNMLP00000043013	Mitochondrial ribosomal protein L3.	Mitochondrial ribosomal protein S6.	0.999
ENSNMLP00000016657	ENSNMLP00000010706	Mitochondrial ribosomal protein L22.	Mitochondrial ribosomal protein L3.	0.999
ENSNMLP00000016657	ENSNMLP00000025662	Mitochondrial ribosomal protein L22.	Mitochondrial ribosomal protein L27.	0.999
ENSNMLP00000016657	ENSNMLP00000032742	Mitochondrial ribosomal protein L22.	Mitochondrial ribosomal protein L13.	0.999
ENSNMLP00000016657	ENSNMLP00000043013	Mitochondrial ribosomal protein L22.	Mitochondrial ribosomal protein S6.	0.999
ENSNMLP00000025662	ENSNMLP00000010706	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L3.	0.998
ENSNMLP00000025662	ENSNMLP00000016657	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L22.	0.999
ENSNMLP00000025662	ENSNMLP00000032742	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L13.	0.999
ENSNMLP00000025662	ENSNMLP00000043013	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein S6.	0.999
ENSNMLP00000032742	ENSNMLP00000010706	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein L3.	0.999
ENSNMLP00000032742	ENSNMLP00000016657	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein L22.	0.999
ENSNMLP00000032742	ENSNMLP00000025662	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein L27.	0.999
ENSNMLP00000032742	ENSNMLP00000043013	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein S6.	0.998
ENSNMLP00000043013	ENSNMLP00000010706	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L3.	0.999
ENSNMLP00000043013	ENSNMLP00000016657	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L22.	0.999
ENSNMLP00000043013	ENSNMLP00000025662	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L27.	0.999
ENSNMLP00000043013	ENSNMLP00000032742	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L13.	0.998