(35 nodes) Clathrin coat, and Extrinsic component of presynaptic membrane network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000000027	annotation not available (685 aa)
	ENSNMLP00000000268	Epidermal growth factor receptor pathway substrate 15. (1110 aa)
	ENSNMLP00000001164	Adaptor related protein complex 2 subunit alpha 1. (923 aa)
	ENSNMLP00000001816	Adaptor related protein complex 2 subunit sigma 1. (145 aa)
	ENSNMLP00000002798	annotation not available (64 aa)
	ENSNMLP00000003302	annotation not available (853 aa)
	ENSNMLP00000004244	NECAP endocytosis associated 2. (270 aa)
	ENSNMLP00000005675	annotation not available (339 aa)
	ENSNMLP00000005763	Epsin 1. (653 aa)
	ENSNMLP00000007106	Clathrin interactor 1b. (606 aa)
	ENSNMLP00000007296	annotation not available (591 aa)
	ENSNMLP00000010975	Phosphatidylinositol binding clathrin assembly protein b. (681 aa)
	ENSNMLP00000012464	Synaptosome associated protein 91b. (238 aa)
	YTHDC2	YTH domain containing 2. (1387 aa)
	ENSNMLP00000013532	RALBP1 associated Eps domain containing 1. (817 aa)
	ENSNMLP00000015899	Adaptor related protein complex 2 subunit mu 1a. (461 aa)
	ENSNMLP00000018758	annotation not available (1214 aa)
	ENSNMLP00000020581	Clathrin, light chain B. (200 aa)
	ENSNMLP00000021499	Si:ch211-200p22.4. (581 aa)
	ENSNMLP00000021857	annotation not available (351 aa)
	ENSNMLP00000023600	Si:ch211-200p22.4. (315 aa)
	ENSNMLP00000023899	annotation not available (598 aa)
	ENSNMLP00000024839	annotation not available (95 aa)
	ENSNMLP00000027117	annotation not available (77 aa)
	ENSNMLP00000027311	Zgc:194578. (562 aa)
	ENSNMLP00000027313	annotation not available (262 aa)
	ENSNMLP00000029840	Huntingtin interacting protein 1. (1061 aa)
	ENSNMLP00000030929	annotation not available (226 aa)
	ENSNMLP00000036999	Clathrin, light chain A. (232 aa)
	ENSNMLP00000037692	Epidermal growth factor receptor pathway substrate 15-like 1a. (848 aa)
	ENSNMLP00000038517	annotation not available (1210 aa)
	ENSNMLP00000038663	Epsin 2. (568 aa)
	ENSNMLP00000038887	Adaptor related protein complex 1 subunit beta 1. (957 aa)
	ENSNMLP00000039204	annotation not available (827 aa)
	ENSNMLP00000042735	annotation not available (697 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000000027	ENSNMLP00000000268	ENSNMLP00000000027	ENSNMLP00000000268	annotation not available	Epidermal growth factor receptor pathway substrate 15.	0.761
ENSNMLP00000000027	ENSNMLP00000001164	ENSNMLP00000000027	ENSNMLP00000001164	annotation not available	Adaptor related protein complex 2 subunit alpha 1.	0.911
ENSNMLP00000000027	ENSNMLP00000001816	ENSNMLP00000000027	ENSNMLP00000001816	annotation not available	Adaptor related protein complex 2 subunit sigma 1.	0.772
ENSNMLP00000000027	ENSNMLP00000003302	ENSNMLP00000000027	ENSNMLP00000003302	annotation not available	annotation not available	0.694
ENSNMLP00000000027	ENSNMLP00000004244	ENSNMLP00000000027	ENSNMLP00000004244	annotation not available	NECAP endocytosis associated 2.	0.577
ENSNMLP00000000027	ENSNMLP00000005675	ENSNMLP00000000027	ENSNMLP00000005675	annotation not available	annotation not available	0.577
ENSNMLP00000000027	ENSNMLP00000005763	ENSNMLP00000000027	ENSNMLP00000005763	annotation not available	Epsin 1.	0.624
ENSNMLP00000000027	ENSNMLP00000007106	ENSNMLP00000000027	ENSNMLP00000007106	annotation not available	Clathrin interactor 1b.	0.666
ENSNMLP00000000027	ENSNMLP00000007296	ENSNMLP00000000027	ENSNMLP00000007296	annotation not available	annotation not available	0.769
ENSNMLP00000000027	ENSNMLP00000013532	ENSNMLP00000000027	ENSNMLP00000013532	annotation not available	RALBP1 associated Eps domain containing 1.	0.491
ENSNMLP00000000027	ENSNMLP00000015899	ENSNMLP00000000027	ENSNMLP00000015899	annotation not available	Adaptor related protein complex 2 subunit mu 1a.	0.872
ENSNMLP00000000027	ENSNMLP00000018758	ENSNMLP00000000027	ENSNMLP00000018758	annotation not available	annotation not available	0.740
ENSNMLP00000000027	ENSNMLP00000020581	ENSNMLP00000000027	ENSNMLP00000020581	annotation not available	Clathrin, light chain B.	0.705
ENSNMLP00000000027	ENSNMLP00000021857	ENSNMLP00000000027	ENSNMLP00000021857	annotation not available	annotation not available	0.700
ENSNMLP00000000027	ENSNMLP00000023899	ENSNMLP00000000027	ENSNMLP00000023899	annotation not available	annotation not available	0.769
ENSNMLP00000000027	ENSNMLP00000024839	ENSNMLP00000000027	ENSNMLP00000024839	annotation not available	annotation not available	0.624
ENSNMLP00000000027	ENSNMLP00000027117	ENSNMLP00000000027	ENSNMLP00000027117	annotation not available	annotation not available	0.624
ENSNMLP00000000027	ENSNMLP00000027311	ENSNMLP00000000027	ENSNMLP00000027311	annotation not available	Zgc:194578.	0.458
ENSNMLP00000000027	ENSNMLP00000027313	ENSNMLP00000000027	ENSNMLP00000027313	annotation not available	annotation not available	0.577
ENSNMLP00000000027	ENSNMLP00000029840	ENSNMLP00000000027	ENSNMLP00000029840	annotation not available	Huntingtin interacting protein 1.	0.789