(25 nodes) Mixed, incl. Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family, and Platelet-derived growth factor receptor activity network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000003073	annotation not available (229 aa)
	ENSNMLP00000003552	Kinase insert domain receptor like. (1294 aa)
	ENSNMLP00000005593	KIT proto-oncogene, receptor tyrosine kinase b. (867 aa)
	ENSNMLP00000005913	Fibroblast growth factor 2. (155 aa)
	ENSNMLP00000007568	Hepatocyte growth factor b. (674 aa)
	ENSNMLP00000010637	Platelet-derived growth factor receptor-like. (367 aa)
	ENSNMLP00000010799	annotation not available (194 aa)
	ENSNMLP00000010889	Interleukin 34. (216 aa)
	ENSNMLP00000012569	Fms-related tyrosine kinase 3. (1065 aa)
	ENSNMLP00000012718	Placental growth factor b. (162 aa)
	ENSNMLP00000016327	annotation not available (173 aa)
	ENSNMLP00000018675	annotation not available (1168 aa)
	ENSNMLP00000019879	Fms-related tyrosine kinase 4. (1341 aa)
	ENSNMLP00000020371	annotation not available (966 aa)
	ENSNMLP00000022324	Platelet-derived growth factor alpha polypeptide b. (230 aa)
	ENSNMLP00000024310	annotation not available (314 aa)
	ENSNMLP00000024323	Vascular endothelial growth factor Ab. (213 aa)
	ENSNMLP00000025737	Platelet derived growth factor c. (342 aa)
	ENSNMLP00000027365	Platelet derived growth factor d. (311 aa)
	ENSNMLP00000029465	Hepatocyte growth factor a. (701 aa)
	ENSNMLP00000032705	Vascular endothelial growth factor c. (419 aa)
	ENSNMLP00000032769	annotation not available (252 aa)
	ENSNMLP00000033575	Platelet-derived growth factor receptor, beta polypeptide. (589 aa)
	ENSNMLP00000035449	Platelet-derived growth factor receptor, alpha polypeptide. (1462 aa)
	ENSNMLP00000040270	Vascular endothelial growth factor D. (259 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000003073	ENSNMLP00000003552	annotation not available	Kinase insert domain receptor like.	0.891
ENSNMLP00000003073	ENSNMLP00000005593	annotation not available	KIT proto-oncogene, receptor tyrosine kinase b.	0.877
ENSNMLP00000003073	ENSNMLP00000007568	annotation not available	Hepatocyte growth factor b.	0.860
ENSNMLP00000003073	ENSNMLP00000010637	annotation not available	Platelet-derived growth factor receptor-like.	0.729
ENSNMLP00000003073	ENSNMLP00000010799	annotation not available	annotation not available	0.868
ENSNMLP00000003073	ENSNMLP00000012569	annotation not available	Fms-related tyrosine kinase 3.	0.891
ENSNMLP00000003073	ENSNMLP00000012718	annotation not available	Placental growth factor b.	0.869
ENSNMLP00000003073	ENSNMLP00000016327	annotation not available	annotation not available	0.854
ENSNMLP00000003073	ENSNMLP00000018675	annotation not available	annotation not available	0.944
ENSNMLP00000003073	ENSNMLP00000019879	annotation not available	Fms-related tyrosine kinase 4.	0.891
ENSNMLP00000003073	ENSNMLP00000020371	annotation not available	annotation not available	0.877
ENSNMLP00000003073	ENSNMLP00000022324	annotation not available	Platelet-derived growth factor alpha polypeptide b.	0.876
ENSNMLP00000003073	ENSNMLP00000024323	annotation not available	Vascular endothelial growth factor Ab.	0.858
ENSNMLP00000003073	ENSNMLP00000025737	annotation not available	Platelet derived growth factor c.	0.913
ENSNMLP00000003073	ENSNMLP00000027365	annotation not available	Platelet derived growth factor d.	0.870
ENSNMLP00000003073	ENSNMLP00000029465	annotation not available	Hepatocyte growth factor a.	0.834
ENSNMLP00000003073	ENSNMLP00000032705	annotation not available	Vascular endothelial growth factor c.	0.890
ENSNMLP00000003073	ENSNMLP00000032769	annotation not available	annotation not available	0.916
ENSNMLP00000003073	ENSNMLP00000033575	annotation not available	Platelet-derived growth factor receptor, beta polypeptide.	0.899
ENSNMLP00000003073	ENSNMLP00000035449	annotation not available	Platelet-derived growth factor receptor, alpha polypeptide.	0.896