(30 nodes) Autophagy - other, and Phagophore assembly site membrane network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000001908	WD repeat domain, phosphoinositide interacting 2. (440 aa)
	ENSNMLP00000002033	annotation not available (457 aa)
	ENSNMLP00000002139	Autophagy related 4D, cysteine peptidase a. (494 aa)
	ENSNMLP00000005340	Zgc:92606. (116 aa)
	ENSNMLP00000005827	ATG12 autophagy related 12 homolog (S. cerevisiae). (117 aa)
	ENSNMLP00000006462	Beclin 1, autophagy related. (433 aa)
	ENSNMLP00000011589	Autophagy related 14. (419 aa)
	ENSNMLP00000013339	Unc-51 like autophagy activating kinase 2. (844 aa)
	ENSNMLP00000018729	Autophagy related 4C, cysteine peptidase. (464 aa)
	ENSNMLP00000019731	RB1-inducible coiled-coil 1. (1573 aa)
	ENSNMLP00000021012	PDLIM1 interacting kinase 1 like. (341 aa)
	ENSNMLP00000021760	Nuclear receptor binding factor 2b. (291 aa)
	ENSNMLP00000022286	annotation not available (589 aa)
	ENSNMLP00000022447	Autophagy related 4B, cysteine peptidase. (392 aa)
	ENSNMLP00000023734	ATG9 autophagy related 9 homolog A (S. cerevisiae). (851 aa)
	ENSNMLP00000024502	Autophagy related 101. (259 aa)
	ENSNMLP00000027329	annotation not available (560 aa)
	ENSNMLP00000028777	GABA(A) receptor-associated protein b. (147 aa)
	ENSNMLP00000029587	Autophagy related 3. (315 aa)
	ENSNMLP00000030550	Autophagy related 9B. (851 aa)
	ENSNMLP00000031277	ATG5 autophagy related 5 homolog (S. cerevisiae). (292 aa)
	ENSNMLP00000031729	Unc-51 like kinase 3. (469 aa)
	ENSNMLP00000032262	Phosphatidylinositol 3-kinase, catalytic subunit type 3. (904 aa)
	ENSNMLP00000035729	Autophagy related 4D, cysteine peptidase b. (397 aa)
	ENSNMLP00000036272	ATG7 autophagy related 7 homolog (S. cerevisiae). (719 aa)
	ENSNMLP00000037648	Microtubule-associated protein 1 light chain 3 alpha. (121 aa)
	GABARAPL2	GABA type A receptor associated protein like 2. (123 aa)
	ENSNMLP00000044421	Unc-51 like autophagy activating kinase 1. (783 aa)
	ENSNMLP00000044676	ATG13 autophagy related 13 homolog (S. cerevisiae). (480 aa)
	ENSNMLP00000044861	Si:ch211-63o20.7. (394 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000001908	ENSNMLP00000002033	ENSNMLP00000001908	ENSNMLP00000002033	WD repeat domain, phosphoinositide interacting 2.	annotation not available	0.827
ENSNMLP00000001908	ENSNMLP00000002139	ENSNMLP00000001908	ENSNMLP00000002139	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 4D, cysteine peptidase a.	0.547
ENSNMLP00000001908	ENSNMLP00000005340	ENSNMLP00000001908	ENSNMLP00000005340	WD repeat domain, phosphoinositide interacting 2.	Zgc:92606.	0.730
ENSNMLP00000001908	ENSNMLP00000005827	ENSNMLP00000001908	ENSNMLP00000005827	WD repeat domain, phosphoinositide interacting 2.	ATG12 autophagy related 12 homolog (S. cerevisiae).	0.941
ENSNMLP00000001908	ENSNMLP00000006462	ENSNMLP00000001908	ENSNMLP00000006462	WD repeat domain, phosphoinositide interacting 2.	Beclin 1, autophagy related.	0.904
ENSNMLP00000001908	ENSNMLP00000011589	ENSNMLP00000001908	ENSNMLP00000011589	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 14.	0.785
ENSNMLP00000001908	ENSNMLP00000013339	ENSNMLP00000001908	ENSNMLP00000013339	WD repeat domain, phosphoinositide interacting 2.	Unc-51 like autophagy activating kinase 2.	0.855
ENSNMLP00000001908	ENSNMLP00000018729	ENSNMLP00000001908	ENSNMLP00000018729	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 4C, cysteine peptidase.	0.547
ENSNMLP00000001908	ENSNMLP00000019731	ENSNMLP00000001908	ENSNMLP00000019731	WD repeat domain, phosphoinositide interacting 2.	RB1-inducible coiled-coil 1.	0.522
ENSNMLP00000001908	ENSNMLP00000021012	ENSNMLP00000001908	ENSNMLP00000021012	WD repeat domain, phosphoinositide interacting 2.	PDLIM1 interacting kinase 1 like.	0.725
ENSNMLP00000001908	ENSNMLP00000022286	ENSNMLP00000001908	ENSNMLP00000022286	WD repeat domain, phosphoinositide interacting 2.	annotation not available	0.864
ENSNMLP00000001908	ENSNMLP00000022447	ENSNMLP00000001908	ENSNMLP00000022447	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 4B, cysteine peptidase.	0.635
ENSNMLP00000001908	ENSNMLP00000023734	ENSNMLP00000001908	ENSNMLP00000023734	WD repeat domain, phosphoinositide interacting 2.	ATG9 autophagy related 9 homolog A (S. cerevisiae).	0.916
ENSNMLP00000001908	ENSNMLP00000024502	ENSNMLP00000001908	ENSNMLP00000024502	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 101.	0.511
ENSNMLP00000001908	ENSNMLP00000027329	ENSNMLP00000001908	ENSNMLP00000027329	WD repeat domain, phosphoinositide interacting 2.	annotation not available	0.988
ENSNMLP00000001908	ENSNMLP00000028777	ENSNMLP00000001908	ENSNMLP00000028777	WD repeat domain, phosphoinositide interacting 2.	GABA(A) receptor-associated protein b.	0.821
ENSNMLP00000001908	ENSNMLP00000029587	ENSNMLP00000001908	ENSNMLP00000029587	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 3.	0.859
ENSNMLP00000001908	ENSNMLP00000030550	ENSNMLP00000001908	ENSNMLP00000030550	WD repeat domain, phosphoinositide interacting 2.	Autophagy related 9B.	0.916
ENSNMLP00000001908	ENSNMLP00000031277	ENSNMLP00000001908	ENSNMLP00000031277	WD repeat domain, phosphoinositide interacting 2.	ATG5 autophagy related 5 homolog (S. cerevisiae).	0.941
ENSNMLP00000001908	ENSNMLP00000031729	ENSNMLP00000001908	ENSNMLP00000031729	WD repeat domain, phosphoinositide interacting 2.	Unc-51 like kinase 3.	0.725