(24 nodes) Endocrine process, and Neurohypophysial hormones network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000002046	Arginine vasopressin receptor 2a, duplicate b. (513 aa)
	ENSNMLP00000003788	Endothelin receptor Ba. (417 aa)
	AVPR1A	Arginine vasopressin receptor 1A. (390 aa)
	ENSNMLP00000006243	Si:dkey-178o16.4. (336 aa)
	ENSNMLP00000009588	Angiotensin II receptor, type 1b. (343 aa)
	ENSNMLP00000010590	annotation not available (411 aa)
	ENSNMLP00000022738	annotation not available (110 aa)
	ENSNMLP00000023957	Endothelin receptor type Ab. (440 aa)
	ENSNMLP00000025408	annotation not available (77 aa)
	ENSNMLP00000025665	Endothelin 2. (164 aa)
	ENSNMLP00000028239	annotation not available (395 aa)
	ENSNMLP00000028321	Endothelin receptor type Aa. (440 aa)
	ENSNMLP00000029837	Angiotensin II receptor, type 2. (408 aa)
	ENSNMLP00000029940	annotation not available (416 aa)
	ENSNMLP00000030182	Angiotensinogen. (528 aa)
	ENSNMLP00000031828	Endothelin receptor type Bb. (428 aa)
	ENSNMLP00000033174	annotation not available (137 aa)
	ENSNMLP00000034330	annotation not available (157 aa)
	ENSNMLP00000036617	annotation not available (329 aa)
	ENSNMLP00000037328	Neuropeptide Y. (120 aa)
	ENSNMLP00000038462	Oxytocin. (152 aa)
	ENSNMLP00000038556	Arginine vasopressin. (151 aa)
	ENSNMLP00000042351	Oxytocin receptor. (370 aa)
	ENSNMLP00000042632	Growth hormone secretagogue receptor b. (366 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AVPR1A	ENSNMLP00000002046	ENSNMLP00000005699	ENSNMLP00000002046	Arginine vasopressin receptor 1A.	Arginine vasopressin receptor 2a, duplicate b.	0.800
AVPR1A	ENSNMLP00000006243	ENSNMLP00000005699	ENSNMLP00000006243	Arginine vasopressin receptor 1A.	Si:dkey-178o16.4.	0.822
AVPR1A	ENSNMLP00000022738	ENSNMLP00000005699	ENSNMLP00000022738	Arginine vasopressin receptor 1A.	annotation not available	0.780
AVPR1A	ENSNMLP00000025665	ENSNMLP00000005699	ENSNMLP00000025665	Arginine vasopressin receptor 1A.	Endothelin 2.	0.486
AVPR1A	ENSNMLP00000028239	ENSNMLP00000005699	ENSNMLP00000028239	Arginine vasopressin receptor 1A.	annotation not available	0.839
AVPR1A	ENSNMLP00000030182	ENSNMLP00000005699	ENSNMLP00000030182	Arginine vasopressin receptor 1A.	Angiotensinogen.	0.625
AVPR1A	ENSNMLP00000033174	ENSNMLP00000005699	ENSNMLP00000033174	Arginine vasopressin receptor 1A.	annotation not available	0.681
AVPR1A	ENSNMLP00000034330	ENSNMLP00000005699	ENSNMLP00000034330	Arginine vasopressin receptor 1A.	annotation not available	0.762
AVPR1A	ENSNMLP00000036617	ENSNMLP00000005699	ENSNMLP00000036617	Arginine vasopressin receptor 1A.	annotation not available	0.821
AVPR1A	ENSNMLP00000037328	ENSNMLP00000005699	ENSNMLP00000037328	Arginine vasopressin receptor 1A.	Neuropeptide Y.	0.645
AVPR1A	ENSNMLP00000038462	ENSNMLP00000005699	ENSNMLP00000038462	Arginine vasopressin receptor 1A.	Oxytocin.	0.891
AVPR1A	ENSNMLP00000038556	ENSNMLP00000005699	ENSNMLP00000038556	Arginine vasopressin receptor 1A.	Arginine vasopressin.	0.945
AVPR1A	ENSNMLP00000042632	ENSNMLP00000005699	ENSNMLP00000042632	Arginine vasopressin receptor 1A.	Growth hormone secretagogue receptor b.	0.401
ENSNMLP00000002046	AVPR1A	ENSNMLP00000002046	ENSNMLP00000005699	Arginine vasopressin receptor 2a, duplicate b.	Arginine vasopressin receptor 1A.	0.800
ENSNMLP00000002046	ENSNMLP00000006243	ENSNMLP00000002046	ENSNMLP00000006243	Arginine vasopressin receptor 2a, duplicate b.	Si:dkey-178o16.4.	0.699
ENSNMLP00000002046	ENSNMLP00000022738	ENSNMLP00000002046	ENSNMLP00000022738	Arginine vasopressin receptor 2a, duplicate b.	annotation not available	0.780
ENSNMLP00000002046	ENSNMLP00000025665	ENSNMLP00000002046	ENSNMLP00000025665	Arginine vasopressin receptor 2a, duplicate b.	Endothelin 2.	0.486
ENSNMLP00000002046	ENSNMLP00000030182	ENSNMLP00000002046	ENSNMLP00000030182	Arginine vasopressin receptor 2a, duplicate b.	Angiotensinogen.	0.625
ENSNMLP00000002046	ENSNMLP00000033174	ENSNMLP00000002046	ENSNMLP00000033174	Arginine vasopressin receptor 2a, duplicate b.	annotation not available	0.681
ENSNMLP00000002046	ENSNMLP00000034330	ENSNMLP00000002046	ENSNMLP00000034330	Arginine vasopressin receptor 2a, duplicate b.	annotation not available	0.762