(6 nodes) HAUS complex network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000007685	annotation not available (124 aa)
	ENSNMLP00000009765	HAUS augmin-like complex, subunit 1. (273 aa)
	ENSNMLP00000014463	HAUS augmin-like complex, subunit 5. (653 aa)
	ENSNMLP00000015400	annotation not available (180 aa)
	ENSNMLP00000015744	annotation not available (375 aa)
	ENSNMLP00000032333	HAUS augmin-like complex, subunit 3. (603 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000007685	ENSNMLP00000009765	annotation not available	HAUS augmin-like complex, subunit 1.	0.993
ENSNMLP00000007685	ENSNMLP00000014463	annotation not available	HAUS augmin-like complex, subunit 5.	0.993
ENSNMLP00000007685	ENSNMLP00000015400	annotation not available	annotation not available	0.994
ENSNMLP00000007685	ENSNMLP00000015744	annotation not available	annotation not available	0.993
ENSNMLP00000007685	ENSNMLP00000032333	annotation not available	HAUS augmin-like complex, subunit 3.	0.993
ENSNMLP00000009765	ENSNMLP00000007685	HAUS augmin-like complex, subunit 1.	annotation not available	0.993
ENSNMLP00000009765	ENSNMLP00000014463	HAUS augmin-like complex, subunit 1.	HAUS augmin-like complex, subunit 5.	0.991
ENSNMLP00000009765	ENSNMLP00000015400	HAUS augmin-like complex, subunit 1.	annotation not available	0.992
ENSNMLP00000009765	ENSNMLP00000015744	HAUS augmin-like complex, subunit 1.	annotation not available	0.993
ENSNMLP00000009765	ENSNMLP00000032333	HAUS augmin-like complex, subunit 1.	HAUS augmin-like complex, subunit 3.	0.996
ENSNMLP00000014463	ENSNMLP00000007685	HAUS augmin-like complex, subunit 5.	annotation not available	0.993
ENSNMLP00000014463	ENSNMLP00000009765	HAUS augmin-like complex, subunit 5.	HAUS augmin-like complex, subunit 1.	0.991
ENSNMLP00000014463	ENSNMLP00000015400	HAUS augmin-like complex, subunit 5.	annotation not available	0.991
ENSNMLP00000014463	ENSNMLP00000015744	HAUS augmin-like complex, subunit 5.	annotation not available	0.994
ENSNMLP00000014463	ENSNMLP00000032333	HAUS augmin-like complex, subunit 5.	HAUS augmin-like complex, subunit 3.	0.996
ENSNMLP00000015400	ENSNMLP00000007685	annotation not available	annotation not available	0.994
ENSNMLP00000015400	ENSNMLP00000009765	annotation not available	HAUS augmin-like complex, subunit 1.	0.992
ENSNMLP00000015400	ENSNMLP00000014463	annotation not available	HAUS augmin-like complex, subunit 5.	0.991
ENSNMLP00000015400	ENSNMLP00000015744	annotation not available	annotation not available	0.991
ENSNMLP00000015400	ENSNMLP00000032333	annotation not available	HAUS augmin-like complex, subunit 3.	0.991