(37 nodes) Mostly uncharacterized, incl. Morphogenesis of follicular epithelium, and Paralemmin network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000000826	annotation not available (445 aa)
	ENSNMLP00000001468	annotation not available (467 aa)
	ENSNMLP00000002173	annotation not available (197 aa)
	ENSNMLP00000002221	annotation not available (224 aa)
	ENSNMLP00000002233	annotation not available (188 aa)
	ENSNMLP00000003594	Kelch repeat and BTB (POZ) domain containing 11. (410 aa)
	ENSNMLP00000004697	Keratinocyte differentiation factor 1b. (361 aa)
	ENSNMLP00000004740	annotation not available (295 aa)
	ENSNMLP00000005490	annotation not available (280 aa)
	ENSNMLP00000008174	Si:dkey-34d22.1. (589 aa)
	ENSNMLP00000008279	Palm2 and akap2 fusion. (638 aa)
	ENSNMLP00000008285	Palm2 and akap2 fusion. (264 aa)
	ENSNMLP00000008480	annotation not available (421 aa)
	ENSNMLP00000008736	Centromere protein O. (285 aa)
	ENSNMLP00000011219	annotation not available (183 aa)
	ENSNMLP00000011397	Cellular communication network factor 4a. (357 aa)
	ENSNMLP00000013599	annotation not available (201 aa)
	ENSNMLP00000014515	Zinc finger protein 148. (774 aa)
	ENSNMLP00000017837	Spermatogenesis associated 2. (565 aa)
	ENSNMLP00000017958	Zinc fingers and homeoboxes 3. (909 aa)
	ENSNMLP00000020270	annotation not available (464 aa)
	ENSNMLP00000022513	annotation not available (217 aa)
	ENSNMLP00000023122	Chondroitin sulfate proteoglycan 5a. (494 aa)
	ENSNMLP00000029278	annotation not available (225 aa)
	ENSNMLP00000032491	Pleckstrin homology domain containing, family N member 1. (652 aa)
	ENSNMLP00000033177	annotation not available (435 aa)
	ENSNMLP00000033339	annotation not available (71 aa)
	ENSNMLP00000033419	Zgc:194275. (152 aa)
	ENSNMLP00000034648	annotation not available (837 aa)
	ENSNMLP00000035350	Leucine zipper protein 1. (747 aa)
	ENSNMLP00000036820	annotation not available (856 aa)
	ENSNMLP00000037306	annotation not available (994 aa)
	PALM	Paralemmin. (364 aa)
	ENSNMLP00000039615	Family with sequence similarity 83 member Fa. (533 aa)
	SHF	Src homology 2 domain containing F. (437 aa)
	ENSNMLP00000042367	annotation not available (354 aa)
	ENSNMLP00000042728	annotation not available (551 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000000826	ENSNMLP00000017837	ENSNMLP00000000826	ENSNMLP00000017837	annotation not available	Spermatogenesis associated 2.	0.804
ENSNMLP00000001468	ENSNMLP00000014515	ENSNMLP00000001468	ENSNMLP00000014515	annotation not available	Zinc finger protein 148.	0.450
ENSNMLP00000001468	ENSNMLP00000017837	ENSNMLP00000001468	ENSNMLP00000017837	annotation not available	Spermatogenesis associated 2.	0.418
ENSNMLP00000002173	ENSNMLP00000014515	ENSNMLP00000002173	ENSNMLP00000014515	annotation not available	Zinc finger protein 148.	0.416
ENSNMLP00000002221	ENSNMLP00000014515	ENSNMLP00000002221	ENSNMLP00000014515	annotation not available	Zinc finger protein 148.	0.429
ENSNMLP00000002233	ENSNMLP00000014515	ENSNMLP00000002233	ENSNMLP00000014515	annotation not available	Zinc finger protein 148.	0.439
ENSNMLP00000002233	ENSNMLP00000017837	ENSNMLP00000002233	ENSNMLP00000017837	annotation not available	Spermatogenesis associated 2.	0.417
ENSNMLP00000003594	ENSNMLP00000017958	ENSNMLP00000003594	ENSNMLP00000017958	Kelch repeat and BTB (POZ) domain containing 11.	Zinc fingers and homeoboxes 3.	0.400
ENSNMLP00000004697	ENSNMLP00000033177	ENSNMLP00000004697	ENSNMLP00000033177	Keratinocyte differentiation factor 1b.	annotation not available	0.408
ENSNMLP00000005490	ENSNMLP00000033177	ENSNMLP00000005490	ENSNMLP00000033177	annotation not available	annotation not available	0.409
ENSNMLP00000008174	ENSNMLP00000029278	ENSNMLP00000008174	ENSNMLP00000029278	Si:dkey-34d22.1.	annotation not available	0.497
ENSNMLP00000008279	ENSNMLP00000008285	ENSNMLP00000008279	ENSNMLP00000008285	Palm2 and akap2 fusion.	Palm2 and akap2 fusion.	0.904
ENSNMLP00000008279	ENSNMLP00000011219	ENSNMLP00000008279	ENSNMLP00000011219	Palm2 and akap2 fusion.	annotation not available	0.495
ENSNMLP00000008279	PALM	ENSNMLP00000008279	ENSNMLP00000037739	Palm2 and akap2 fusion.	Paralemmin.	0.713
ENSNMLP00000008285	ENSNMLP00000008279	ENSNMLP00000008285	ENSNMLP00000008279	Palm2 and akap2 fusion.	Palm2 and akap2 fusion.	0.904
ENSNMLP00000008480	ENSNMLP00000032491	ENSNMLP00000008480	ENSNMLP00000032491	annotation not available	Pleckstrin homology domain containing, family N member 1.	0.437
ENSNMLP00000008480	ENSNMLP00000033177	ENSNMLP00000008480	ENSNMLP00000033177	annotation not available	annotation not available	0.443
ENSNMLP00000011219	ENSNMLP00000008279	ENSNMLP00000011219	ENSNMLP00000008279	annotation not available	Palm2 and akap2 fusion.	0.495
ENSNMLP00000014515	ENSNMLP00000001468	ENSNMLP00000014515	ENSNMLP00000001468	Zinc finger protein 148.	annotation not available	0.450
ENSNMLP00000014515	ENSNMLP00000002173	ENSNMLP00000014515	ENSNMLP00000002173	Zinc finger protein 148.	annotation not available	0.416