(16 nodes) Semaphorin receptor activity network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000039562	annotation not available (618 aa)
	PLXND1	Plexin D1. (1822 aa)
	ENSNMLP00000023007	Plexin b2b. (1847 aa)
	ENSNMLP00000030186	Plexin b2a. (1858 aa)
	ENSNMLP00000044497	annotation not available (633 aa)
	ENSNMLP00000033544	Macrophage stimulating 1 receptor a. (1348 aa)
	ENSNMLP00000033620	annotation not available (1891 aa)
	ENSNMLP00000035114	annotation not available (317 aa)
	ENSNMLP00000035126	annotation not available (252 aa)
	ENSNMLP00000037356	Plexin A4. (1886 aa)
	ENSNMLP00000040153	annotation not available (679 aa)
	ENSNMLP00000042455	annotation not available (255 aa)
	ENSNMLP00000042456	annotation not available (391 aa)
	ENSNMLP00000005603	Neuropilin 1a. (908 aa)
	ENSNMLP00000015226	Plexin A2. (1886 aa)
	ENSNMLP00000018317	MET proto-oncogene, receptor tyrosine kinase. (1285 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000005603	ENSNMLP00000015226	ENSNMLP00000005603	ENSNMLP00000015226	Neuropilin 1a.	Plexin A2.	0.871
ENSNMLP00000005603	ENSNMLP00000018317	ENSNMLP00000005603	ENSNMLP00000018317	Neuropilin 1a.	MET proto-oncogene, receptor tyrosine kinase.	0.684
ENSNMLP00000005603	ENSNMLP00000023007	ENSNMLP00000005603	ENSNMLP00000023007	Neuropilin 1a.	Plexin b2b.	0.849
ENSNMLP00000005603	ENSNMLP00000030186	ENSNMLP00000005603	ENSNMLP00000030186	Neuropilin 1a.	Plexin b2a.	0.849
ENSNMLP00000005603	ENSNMLP00000033544	ENSNMLP00000005603	ENSNMLP00000033544	Neuropilin 1a.	Macrophage stimulating 1 receptor a.	0.684
ENSNMLP00000005603	ENSNMLP00000033620	ENSNMLP00000005603	ENSNMLP00000033620	Neuropilin 1a.	annotation not available	0.871
ENSNMLP00000005603	ENSNMLP00000035114	ENSNMLP00000005603	ENSNMLP00000035114	Neuropilin 1a.	annotation not available	0.871
ENSNMLP00000005603	ENSNMLP00000035126	ENSNMLP00000005603	ENSNMLP00000035126	Neuropilin 1a.	annotation not available	0.871
ENSNMLP00000005603	ENSNMLP00000037356	ENSNMLP00000005603	ENSNMLP00000037356	Neuropilin 1a.	Plexin A4.	0.871
ENSNMLP00000005603	ENSNMLP00000039562	ENSNMLP00000005603	ENSNMLP00000039562	Neuropilin 1a.	annotation not available	0.684
ENSNMLP00000005603	ENSNMLP00000040153	ENSNMLP00000005603	ENSNMLP00000040153	Neuropilin 1a.	annotation not available	0.508
ENSNMLP00000005603	ENSNMLP00000042455	ENSNMLP00000005603	ENSNMLP00000042455	Neuropilin 1a.	annotation not available	0.871
ENSNMLP00000005603	ENSNMLP00000042456	ENSNMLP00000005603	ENSNMLP00000042456	Neuropilin 1a.	annotation not available	0.871
ENSNMLP00000005603	ENSNMLP00000044497	ENSNMLP00000005603	ENSNMLP00000044497	Neuropilin 1a.	annotation not available	0.508
ENSNMLP00000005603	PLXND1	ENSNMLP00000005603	ENSNMLP00000022918	Neuropilin 1a.	Plexin D1.	0.871
ENSNMLP00000015226	ENSNMLP00000005603	ENSNMLP00000015226	ENSNMLP00000005603	Plexin A2.	Neuropilin 1a.	0.871
ENSNMLP00000015226	ENSNMLP00000018317	ENSNMLP00000015226	ENSNMLP00000018317	Plexin A2.	MET proto-oncogene, receptor tyrosine kinase.	0.589
ENSNMLP00000015226	ENSNMLP00000033544	ENSNMLP00000015226	ENSNMLP00000033544	Plexin A2.	Macrophage stimulating 1 receptor a.	0.589
ENSNMLP00000015226	ENSNMLP00000039562	ENSNMLP00000015226	ENSNMLP00000039562	Plexin A2.	annotation not available	0.589
ENSNMLP00000018317	ENSNMLP00000005603	ENSNMLP00000018317	ENSNMLP00000005603	MET proto-oncogene, receptor tyrosine kinase.	Neuropilin 1a.	0.684