(4 nodes) Heparin biosynthetic process network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000030988	Glucuronic acid epimerase b. (519 aa)
	ENSNMLP00000003923	Exostosin glycosyltransferase 2. (721 aa)
	ENSNMLP00000027803	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3. (895 aa)
	ENSNMLP00000036948	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a. (887 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000003923	ENSNMLP00000027803	Exostosin glycosyltransferase 2.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	0.553
ENSNMLP00000003923	ENSNMLP00000036948	Exostosin glycosyltransferase 2.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	0.553
ENSNMLP00000027803	ENSNMLP00000003923	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	Exostosin glycosyltransferase 2.	0.553
ENSNMLP00000027803	ENSNMLP00000030988	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	Glucuronic acid epimerase b.	0.929
ENSNMLP00000030988	ENSNMLP00000027803	Glucuronic acid epimerase b.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	0.929
ENSNMLP00000030988	ENSNMLP00000036948	Glucuronic acid epimerase b.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	0.929
ENSNMLP00000036948	ENSNMLP00000003923	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	Exostosin glycosyltransferase 2.	0.553
ENSNMLP00000036948	ENSNMLP00000030988	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	Glucuronic acid epimerase b.	0.929