(68 nodes) Clathrin binding network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000007296	annotation not available (591 aa)
	ENSNMLP00000007106	Clathrin interactor 1b. (606 aa)
	ENSNMLP00000006782	annotation not available (118 aa)
	ENSNMLP00000006722	Synaptotagmin IXa. (505 aa)
	ENSNMLP00000005763	Epsin 1. (653 aa)
	ENSNMLP00000003882	annotation not available (128 aa)
	ENSNMLP00000003675	Synaptotagmin IXb. (510 aa)
	ENSNMLP00000003458	Synaptotagmin VIIb. (476 aa)
	ENSNMLP00000002798	annotation not available (64 aa)
	ENSNMLP00000001816	Adaptor related protein complex 2 subunit sigma 1. (145 aa)
	ENSNMLP00000000027	annotation not available (685 aa)
	ENSNMLP00000000206	Low density lipoprotein receptor adaptor protein 1a. (311 aa)
	ENSNMLP00000000985	Sodium channel and clathrin linker 1. (681 aa)
	CLHC1	Clathrin heavy chain linker domain containing 1. (595 aa)
	ENSNMLP00000001164	Adaptor related protein complex 2 subunit alpha 1. (923 aa)
	ENSNMLP00000001431	Armadillo repeat containing 9. (804 aa)
	ENSNMLP00000041448	General transcription factor IIA, 1-like. (602 aa)
	ENSNMLP00000044148	Synaptotagmin X. (309 aa)
	ENSNMLP00000044150	annotation not available (157 aa)
	ENSNMLP00000044231	Synaptotagmin Ia. (407 aa)
	ENSNMLP00000040445	Synaptotagmin VIIa. (456 aa)
	ENSNMLP00000040867	Synaptotagmin IIa. (284 aa)
	ENSNMLP00000041363	Adaptor related protein complex 4 subunit beta 1. (793 aa)
	ENSNMLP00000038887	Adaptor related protein complex 1 subunit beta 1. (957 aa)
	ENSNMLP00000038663	Epsin 2. (568 aa)
	ENSNMLP00000038517	annotation not available (1210 aa)
	ENSNMLP00000038241	Synaptotagmin III. (539 aa)
	ENSNMLP00000036999	Clathrin, light chain A. (232 aa)
	ENSNMLP00000036190	Adaptor related protein complex 2 subunit beta 1. (944 aa)
	ENSNMLP00000035433	annotation not available (830 aa)
	ENSNMLP00000035282	annotation not available (257 aa)
	ENSNMLP00000035102	annotation not available (392 aa)
	ENSNMLP00000034547	annotation not available (129 aa)
	ENSNMLP00000034217	annotation not available (425 aa)
	ENSNMLP00000031703	Synaptotagmin Vb. (439 aa)
	ENSNMLP00000031287	Synaptotagmin XIb. (419 aa)
	ENSNMLP00000031237	DnaJ (Hsp40) homolog, subfamily C, member 6. (885 aa)
	ENSNMLP00000029840	Huntingtin interacting protein 1. (1061 aa)
	ENSNMLP00000028827	annotation not available (185 aa)
	ENSNMLP00000028793	Target of myb1 like 2 membrane trafficking protein. (520 aa)
	ENSNMLP00000027598	Low density lipoprotein receptor adaptor protein 1b. (321 aa)
	ENSNMLP00000027311	Zgc:194578. (562 aa)
	ENSNMLP00000027117	annotation not available (77 aa)
	ENSNMLP00000024839	annotation not available (95 aa)
	ENSNMLP00000024778	DAB adaptor protein 1b. (223 aa)
	ENSNMLP00000023899	annotation not available (598 aa)
	ENSNMLP00000023600	Si:ch211-200p22.4. (315 aa)
	ENSNMLP00000022020	TEPSIN adaptor related protein complex 4 accessory protein. (481 aa)
	ENSNMLP00000021988	annotation not available (508 aa)
	ENSNMLP00000021857	annotation not available (351 aa)
	ENSNMLP00000021499	Si:ch211-200p22.4. (581 aa)
	ENSNMLP00000020581	Clathrin, light chain B. (200 aa)
	ENSNMLP00000019425	Target of myb1 membrane trafficking protein. (472 aa)
	ENSNMLP00000018963	Neuronal vesicle trafficking associated 2. (196 aa)
	ENSNMLP00000018758	annotation not available (1214 aa)
	ENSNMLP00000018093	Clathrin interactor 1a. (607 aa)
	ENSNMLP00000017076	annotation not available (362 aa)
	ENSNMLP00000015899	Adaptor related protein complex 2 subunit mu 1a. (461 aa)
	ENSNMLP00000014908	G protein-coupled receptor 108. (566 aa)
	ENSNMLP00000013395	Adaptor related protein complex 1 subunit gamma 1. (576 aa)
	ENSNMLP00000013274	annotation not available (252 aa)
	ENSNMLP00000012685	Synaptotagmin Va. (430 aa)
	ENSNMLP00000012464	Synaptosome associated protein 91b. (238 aa)
	ENSNMLP00000011537	Synaptotagmin VIa. (425 aa)
	ENSNMLP00000010975	Phosphatidylinositol binding clathrin assembly protein b. (681 aa)
	ENSNMLP00000010450	Synaptotagmin Ib. (334 aa)
	ENSNMLP00000009931	Synaptotagmin IV. (468 aa)
	ENSNMLP00000007397	annotation not available (502 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLHC1	ENSNMLP00000000027	ENSNMLP00000001082	ENSNMLP00000000027	Clathrin heavy chain linker domain containing 1.	annotation not available	0.700
CLHC1	ENSNMLP00000000206	ENSNMLP00000001082	ENSNMLP00000000206	Clathrin heavy chain linker domain containing 1.	Low density lipoprotein receptor adaptor protein 1a.	0.468
CLHC1	ENSNMLP00000001164	ENSNMLP00000001082	ENSNMLP00000001164	Clathrin heavy chain linker domain containing 1.	Adaptor related protein complex 2 subunit alpha 1.	0.928
CLHC1	ENSNMLP00000001816	ENSNMLP00000001082	ENSNMLP00000001816	Clathrin heavy chain linker domain containing 1.	Adaptor related protein complex 2 subunit sigma 1.	0.859
CLHC1	ENSNMLP00000002798	ENSNMLP00000001082	ENSNMLP00000002798	Clathrin heavy chain linker domain containing 1.	annotation not available	0.700
CLHC1	ENSNMLP00000005763	ENSNMLP00000001082	ENSNMLP00000005763	Clathrin heavy chain linker domain containing 1.	Epsin 1.	0.783
CLHC1	ENSNMLP00000007106	ENSNMLP00000001082	ENSNMLP00000007106	Clathrin heavy chain linker domain containing 1.	Clathrin interactor 1b.	0.718
CLHC1	ENSNMLP00000007397	ENSNMLP00000001082	ENSNMLP00000007397	Clathrin heavy chain linker domain containing 1.	annotation not available	0.663
CLHC1	ENSNMLP00000010975	ENSNMLP00000001082	ENSNMLP00000010975	Clathrin heavy chain linker domain containing 1.	Phosphatidylinositol binding clathrin assembly protein b.	0.700
CLHC1	ENSNMLP00000012464	ENSNMLP00000001082	ENSNMLP00000012464	Clathrin heavy chain linker domain containing 1.	Synaptosome associated protein 91b.	0.700
CLHC1	ENSNMLP00000013395	ENSNMLP00000001082	ENSNMLP00000013395	Clathrin heavy chain linker domain containing 1.	Adaptor related protein complex 1 subunit gamma 1.	0.898
CLHC1	ENSNMLP00000015899	ENSNMLP00000001082	ENSNMLP00000015899	Clathrin heavy chain linker domain containing 1.	Adaptor related protein complex 2 subunit mu 1a.	0.888
CLHC1	ENSNMLP00000017076	ENSNMLP00000001082	ENSNMLP00000017076	Clathrin heavy chain linker domain containing 1.	annotation not available	0.783
CLHC1	ENSNMLP00000018093	ENSNMLP00000001082	ENSNMLP00000018093	Clathrin heavy chain linker domain containing 1.	Clathrin interactor 1a.	0.718
CLHC1	ENSNMLP00000018758	ENSNMLP00000001082	ENSNMLP00000018758	Clathrin heavy chain linker domain containing 1.	annotation not available	0.899
CLHC1	ENSNMLP00000019425	ENSNMLP00000001082	ENSNMLP00000019425	Clathrin heavy chain linker domain containing 1.	Target of myb1 membrane trafficking protein.	0.663
CLHC1	ENSNMLP00000020581	ENSNMLP00000001082	ENSNMLP00000020581	Clathrin heavy chain linker domain containing 1.	Clathrin, light chain B.	0.926
CLHC1	ENSNMLP00000021499	ENSNMLP00000001082	ENSNMLP00000021499	Clathrin heavy chain linker domain containing 1.	Si:ch211-200p22.4.	0.700
CLHC1	ENSNMLP00000021988	ENSNMLP00000001082	ENSNMLP00000021988	Clathrin heavy chain linker domain containing 1.	annotation not available	0.663
CLHC1	ENSNMLP00000023600	ENSNMLP00000001082	ENSNMLP00000023600	Clathrin heavy chain linker domain containing 1.	Si:ch211-200p22.4.	0.700