(16 nodes) Plasma lipoprotein particle network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000013909	Lipoprotein lipase. (511 aa)
	ENSNMLP00000016570	annotation not available (981 aa)
	ENSNMLP00000019793	annotation not available (307 aa)
	ENSNMLP00000019797	annotation not available (255 aa)
	ENSNMLP00000019801	Apolipoprotein Eb. (270 aa)
	ENSNMLP00000020069	Cholesteryl ester transfer protein, plasma. (504 aa)
	ENSNMLP00000028367	Apolipoprotein Bb, tandem duplicate 2. (3806 aa)
	APOH	Apolipoprotein H. (352 aa)
	ENSNMLP00000029525	annotation not available (372 aa)
	ENSNMLP00000029846	annotation not available (869 aa)
	ENSNMLP00000032026	Low density lipoprotein receptor a. (908 aa)
	ENSNMLP00000035622	Phospholipid transfer protein. (483 aa)
	ENSNMLP00000038758	Lecithin-cholesterol acyltransferase. (462 aa)
	ENSNMLP00000042649	Very low density lipoprotein receptor. (904 aa)
	ENSNMLP00000002019	Low density lipoprotein receptor b. (766 aa)
	ENSNMLP00000008610	annotation not available (459 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOH	ENSNMLP00000002019	ENSNMLP00000029521	ENSNMLP00000002019	Apolipoprotein H.	Low density lipoprotein receptor b.	0.588
APOH	ENSNMLP00000008610	ENSNMLP00000029521	ENSNMLP00000008610	Apolipoprotein H.	annotation not available	0.713
APOH	ENSNMLP00000013909	ENSNMLP00000029521	ENSNMLP00000013909	Apolipoprotein H.	Lipoprotein lipase.	0.713
APOH	ENSNMLP00000016570	ENSNMLP00000029521	ENSNMLP00000016570	Apolipoprotein H.	annotation not available	0.587
APOH	ENSNMLP00000019793	ENSNMLP00000029521	ENSNMLP00000019793	Apolipoprotein H.	annotation not available	0.914
APOH	ENSNMLP00000019797	ENSNMLP00000029521	ENSNMLP00000019797	Apolipoprotein H.	annotation not available	0.914
APOH	ENSNMLP00000019801	ENSNMLP00000029521	ENSNMLP00000019801	Apolipoprotein H.	Apolipoprotein Eb.	0.847
APOH	ENSNMLP00000020069	ENSNMLP00000029521	ENSNMLP00000020069	Apolipoprotein H.	Cholesteryl ester transfer protein, plasma.	0.822
APOH	ENSNMLP00000028367	ENSNMLP00000029521	ENSNMLP00000028367	Apolipoprotein H.	Apolipoprotein Bb, tandem duplicate 2.	0.962
APOH	ENSNMLP00000029846	ENSNMLP00000029521	ENSNMLP00000029846	Apolipoprotein H.	annotation not available	0.587
APOH	ENSNMLP00000032026	ENSNMLP00000029521	ENSNMLP00000032026	Apolipoprotein H.	Low density lipoprotein receptor a.	0.588
APOH	ENSNMLP00000035622	ENSNMLP00000029521	ENSNMLP00000035622	Apolipoprotein H.	Phospholipid transfer protein.	0.818
APOH	ENSNMLP00000038758	ENSNMLP00000029521	ENSNMLP00000038758	Apolipoprotein H.	Lecithin-cholesterol acyltransferase.	0.821
APOH	ENSNMLP00000042649	ENSNMLP00000029521	ENSNMLP00000042649	Apolipoprotein H.	Very low density lipoprotein receptor.	0.587
ENSNMLP00000002019	APOH	ENSNMLP00000002019	ENSNMLP00000029521	Low density lipoprotein receptor b.	Apolipoprotein H.	0.588
ENSNMLP00000002019	ENSNMLP00000008610	ENSNMLP00000002019	ENSNMLP00000008610	Low density lipoprotein receptor b.	annotation not available	0.468
ENSNMLP00000002019	ENSNMLP00000013909	ENSNMLP00000002019	ENSNMLP00000013909	Low density lipoprotein receptor b.	Lipoprotein lipase.	0.468
ENSNMLP00000002019	ENSNMLP00000019793	ENSNMLP00000002019	ENSNMLP00000019793	Low density lipoprotein receptor b.	annotation not available	0.484
ENSNMLP00000002019	ENSNMLP00000019797	ENSNMLP00000002019	ENSNMLP00000019797	Low density lipoprotein receptor b.	annotation not available	0.484
ENSNMLP00000002019	ENSNMLP00000019801	ENSNMLP00000002019	ENSNMLP00000019801	Low density lipoprotein receptor b.	Apolipoprotein Eb.	0.862