(12 nodes) Mitochondrial protein processing network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000001086	SPG7 matrix AAA peptidase subunit, paraplegin. (808 aa)
	ENSNMLP00000002339	Inner mitochondrial membrane peptidase subunit 2. (176 aa)
	ENSNMLP00000007054	Si:ch1073-174d20.2. (761 aa)
	ENSNMLP00000011336	Inner mitochondrial membrane peptidase subunit 1. (163 aa)
	ENSNMLP00000011489	annotation not available (199 aa)
	ENSNMLP00000017318	YME1-like 1b. (723 aa)
	ENSNMLP00000019698	ATP23 metallopeptidase and ATP synthase assembly factor homolog. (233 aa)
	ENSNMLP00000020080	OMA1 zinc metallopeptidase. (519 aa)
	ENSNMLP00000021238	YME1-like 1a. (727 aa)
	ENSNMLP00000031829	Mitochondrial intermediate peptidase. (593 aa)
	ENSNMLP00000036231	Peptidase (mitochondrial processing) alpha. (524 aa)
	ENSNMLP00000040902	Stomatin (EPB72)-like 2. (347 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000001086	ENSNMLP00000002339	SPG7 matrix AAA peptidase subunit, paraplegin.	Inner mitochondrial membrane peptidase subunit 2.	0.554
ENSNMLP00000001086	ENSNMLP00000007054	SPG7 matrix AAA peptidase subunit, paraplegin.	Si:ch1073-174d20.2.	0.934
ENSNMLP00000001086	ENSNMLP00000017318	SPG7 matrix AAA peptidase subunit, paraplegin.	YME1-like 1b.	0.887
ENSNMLP00000001086	ENSNMLP00000019698	SPG7 matrix AAA peptidase subunit, paraplegin.	ATP23 metallopeptidase and ATP synthase assembly factor homolog.	0.493
ENSNMLP00000001086	ENSNMLP00000020080	SPG7 matrix AAA peptidase subunit, paraplegin.	OMA1 zinc metallopeptidase.	0.720
ENSNMLP00000001086	ENSNMLP00000021238	SPG7 matrix AAA peptidase subunit, paraplegin.	YME1-like 1a.	0.887
ENSNMLP00000001086	ENSNMLP00000036231	SPG7 matrix AAA peptidase subunit, paraplegin.	Peptidase (mitochondrial processing) alpha.	0.859
ENSNMLP00000001086	ENSNMLP00000040902	SPG7 matrix AAA peptidase subunit, paraplegin.	Stomatin (EPB72)-like 2.	0.827
ENSNMLP00000002339	ENSNMLP00000001086	Inner mitochondrial membrane peptidase subunit 2.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.554
ENSNMLP00000002339	ENSNMLP00000007054	Inner mitochondrial membrane peptidase subunit 2.	Si:ch1073-174d20.2.	0.516
ENSNMLP00000002339	ENSNMLP00000011336	Inner mitochondrial membrane peptidase subunit 2.	Inner mitochondrial membrane peptidase subunit 1.	0.932
ENSNMLP00000002339	ENSNMLP00000011489	Inner mitochondrial membrane peptidase subunit 2.	annotation not available	0.488
ENSNMLP00000002339	ENSNMLP00000019698	Inner mitochondrial membrane peptidase subunit 2.	ATP23 metallopeptidase and ATP synthase assembly factor homolog.	0.613
ENSNMLP00000002339	ENSNMLP00000020080	Inner mitochondrial membrane peptidase subunit 2.	OMA1 zinc metallopeptidase.	0.511
ENSNMLP00000002339	ENSNMLP00000031829	Inner mitochondrial membrane peptidase subunit 2.	Mitochondrial intermediate peptidase.	0.488
ENSNMLP00000002339	ENSNMLP00000036231	Inner mitochondrial membrane peptidase subunit 2.	Peptidase (mitochondrial processing) alpha.	0.540
ENSNMLP00000007054	ENSNMLP00000001086	Si:ch1073-174d20.2.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.934
ENSNMLP00000007054	ENSNMLP00000002339	Si:ch1073-174d20.2.	Inner mitochondrial membrane peptidase subunit 2.	0.516
ENSNMLP00000007054	ENSNMLP00000017318	Si:ch1073-174d20.2.	YME1-like 1b.	0.888
ENSNMLP00000007054	ENSNMLP00000019698	Si:ch1073-174d20.2.	ATP23 metallopeptidase and ATP synthase assembly factor homolog.	0.493