(21 nodes) Platelet-derived growth factor receptor signaling pathway network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000010637	Platelet-derived growth factor receptor-like. (367 aa)
	ENSNMLP00000043862	Zinc finger, AN1-type domain 5a. (208 aa)
	ENSNMLP00000043713	Si:dkey-193c22.2. (2341 aa)
	ENSNMLP00000040640	Lysyl oxidase a. (401 aa)
	ENSNMLP00000035455	Chondroitin sulfate proteoglycan 4. (1328 aa)
	ENSNMLP00000035449	Platelet-derived growth factor receptor, alpha polypeptide. (1462 aa)
	ENSNMLP00000034600	Cysteine-serine-rich nuclear protein 1a. (532 aa)
	ENSNMLP00000033575	Platelet-derived growth factor receptor, beta polypeptide. (589 aa)
	ENSNMLP00000027365	Platelet derived growth factor d. (311 aa)
	ENSNMLP00000025737	Platelet derived growth factor c. (342 aa)
	ENSNMLP00000024323	Vascular endothelial growth factor Ab. (213 aa)
	ENSNMLP00000022324	Platelet-derived growth factor alpha polypeptide b. (230 aa)
	ENSNMLP00000021523	annotation not available (375 aa)
	ENSNMLP00000016327	annotation not available (173 aa)
	ENSNMLP00000015134	C-abl oncogene 2, non-receptor tyrosine kinase. (1150 aa)
	ENSNMLP00000012805	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a. (394 aa)
	ENSNMLP00000012569	Fms-related tyrosine kinase 3. (1065 aa)
	ENSNMLP00000010595	Cysteine-serine-rich nuclear protein 1b. (413 aa)
	ENSNMLP00000005603	Neuropilin 1a. (908 aa)
	ENSNMLP00000003741	Sphingosine-1-phosphate lyase 1. (555 aa)
	ENSNMLP00000002992	Zgc:77486. (203 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000005603	ENSNMLP00000010637	Neuropilin 1a.	Platelet-derived growth factor receptor-like.	0.780
ENSNMLP00000005603	ENSNMLP00000012569	Neuropilin 1a.	Fms-related tyrosine kinase 3.	0.780
ENSNMLP00000005603	ENSNMLP00000016327	Neuropilin 1a.	annotation not available	0.552
ENSNMLP00000005603	ENSNMLP00000021523	Neuropilin 1a.	annotation not available	0.780
ENSNMLP00000005603	ENSNMLP00000024323	Neuropilin 1a.	Vascular endothelial growth factor Ab.	0.647
ENSNMLP00000005603	ENSNMLP00000025737	Neuropilin 1a.	Platelet derived growth factor c.	0.439
ENSNMLP00000005603	ENSNMLP00000033575	Neuropilin 1a.	Platelet-derived growth factor receptor, beta polypeptide.	0.764
ENSNMLP00000005603	ENSNMLP00000035449	Neuropilin 1a.	Platelet-derived growth factor receptor, alpha polypeptide.	0.780
ENSNMLP00000010637	ENSNMLP00000005603	Platelet-derived growth factor receptor-like.	Neuropilin 1a.	0.780
ENSNMLP00000010637	ENSNMLP00000015134	Platelet-derived growth factor receptor-like.	C-abl oncogene 2, non-receptor tyrosine kinase.	0.435
ENSNMLP00000010637	ENSNMLP00000016327	Platelet-derived growth factor receptor-like.	annotation not available	0.848
ENSNMLP00000010637	ENSNMLP00000022324	Platelet-derived growth factor receptor-like.	Platelet-derived growth factor alpha polypeptide b.	0.747
ENSNMLP00000010637	ENSNMLP00000024323	Platelet-derived growth factor receptor-like.	Vascular endothelial growth factor Ab.	0.730
ENSNMLP00000010637	ENSNMLP00000025737	Platelet-derived growth factor receptor-like.	Platelet derived growth factor c.	0.735
ENSNMLP00000010637	ENSNMLP00000027365	Platelet-derived growth factor receptor-like.	Platelet derived growth factor d.	0.732
ENSNMLP00000010637	ENSNMLP00000033575	Platelet-derived growth factor receptor-like.	Platelet-derived growth factor receptor, beta polypeptide.	0.756
ENSNMLP00000012569	ENSNMLP00000005603	Fms-related tyrosine kinase 3.	Neuropilin 1a.	0.780
ENSNMLP00000012569	ENSNMLP00000015134	Fms-related tyrosine kinase 3.	C-abl oncogene 2, non-receptor tyrosine kinase.	0.592
ENSNMLP00000012569	ENSNMLP00000016327	Fms-related tyrosine kinase 3.	annotation not available	0.966
ENSNMLP00000012569	ENSNMLP00000022324	Fms-related tyrosine kinase 3.	Platelet-derived growth factor alpha polypeptide b.	0.964