(5 nodes) Regulation of developmental pigmentation network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000043922	VPS33A core subunit of CORVET and HOPS complexes. (570 aa)
	ENSNMLP00000037436	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (579 aa)
	ENSNMLP00000034676	annotation not available (165 aa)
	ENSNMLP00000019109	Biogenesis of lysosomal organelles complex-1, subunit 5, muted. (153 aa)
	ENSNMLP00000005649	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin. (75 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000005649	ENSNMLP00000019109	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	0.978
ENSNMLP00000005649	ENSNMLP00000037436	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.921
ENSNMLP00000019109	ENSNMLP00000005649	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	0.978
ENSNMLP00000019109	ENSNMLP00000037436	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.862
ENSNMLP00000037436	ENSNMLP00000005649	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	0.921
ENSNMLP00000037436	ENSNMLP00000019109	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	Biogenesis of lysosomal organelles complex-1, subunit 5, muted.	0.862