(17 nodes) Mesodermal cell differentiation network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000033314	Secreted frizzled-related protein 2. (283 aa)
	ENSNMLP00000018741	Wingless-type MMTV integration site family, member 8a. (357 aa)
	ENSNMLP00000018731	Protein Wnt-8a ORF2. (330 aa)
	ENSNMLP00000013986	Integrin, alpha 3b. (993 aa)
	ENSNMLP00000012957	annotation not available (114 aa)
	ENSNMLP00000040448	annotation not available (1385 aa)
	ENSNMLP00000038470	Forkhead box H1. (473 aa)
	ENSNMLP00000036396	Lysocardiolipin acyltransferase 1. (376 aa)
	ENSNMLP00000010042	annotation not available (572 aa)
	ENSNMLP00000007913	annotation not available (327 aa)
	ENSNMLP00000036107	Lysine (K)-specific demethylase 6B, b. (1647 aa)
	ENSNMLP00000002042	annotation not available (138 aa)
	ENSNMLP00000033281	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (175 aa)
	ENSNMLP00000028469	T-cell acute lymphocytic leukemia 1. (409 aa)
	ENSNMLP00000026597	annotation not available (296 aa)
	ENSNMLP00000025874	Bone morphogenetic protein 2b. (373 aa)
	ENSNMLP00000035592	Mesogenin 1. (157 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000010042	ENSNMLP00000036107	annotation not available	Lysine (K)-specific demethylase 6B, b.	0.842
ENSNMLP00000010042	ENSNMLP00000040448	annotation not available	annotation not available	0.850
ENSNMLP00000018731	ENSNMLP00000025874	Protein Wnt-8a ORF2.	Bone morphogenetic protein 2b.	0.440
ENSNMLP00000018731	ENSNMLP00000026597	Protein Wnt-8a ORF2.	annotation not available	0.853
ENSNMLP00000018731	ENSNMLP00000033314	Protein Wnt-8a ORF2.	Secreted frizzled-related protein 2.	0.815
ENSNMLP00000018741	ENSNMLP00000025874	Wingless-type MMTV integration site family, member 8a.	Bone morphogenetic protein 2b.	0.440
ENSNMLP00000018741	ENSNMLP00000026597	Wingless-type MMTV integration site family, member 8a.	annotation not available	0.815
ENSNMLP00000018741	ENSNMLP00000033314	Wingless-type MMTV integration site family, member 8a.	Secreted frizzled-related protein 2.	0.815
ENSNMLP00000025874	ENSNMLP00000018731	Bone morphogenetic protein 2b.	Protein Wnt-8a ORF2.	0.440
ENSNMLP00000025874	ENSNMLP00000018741	Bone morphogenetic protein 2b.	Wingless-type MMTV integration site family, member 8a.	0.440
ENSNMLP00000026597	ENSNMLP00000018731	annotation not available	Protein Wnt-8a ORF2.	0.853
ENSNMLP00000026597	ENSNMLP00000018741	annotation not available	Wingless-type MMTV integration site family, member 8a.	0.815
ENSNMLP00000033314	ENSNMLP00000018731	Secreted frizzled-related protein 2.	Protein Wnt-8a ORF2.	0.815
ENSNMLP00000033314	ENSNMLP00000018741	Secreted frizzled-related protein 2.	Wingless-type MMTV integration site family, member 8a.	0.815
ENSNMLP00000036107	ENSNMLP00000010042	Lysine (K)-specific demethylase 6B, b.	annotation not available	0.842
ENSNMLP00000036107	ENSNMLP00000040448	Lysine (K)-specific demethylase 6B, b.	annotation not available	0.856
ENSNMLP00000040448	ENSNMLP00000010042	annotation not available	annotation not available	0.850
ENSNMLP00000040448	ENSNMLP00000036107	annotation not available	Lysine (K)-specific demethylase 6B, b.	0.856