(12 nodes) Formation of anatomical boundary network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000021663	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (364 aa)
	ENSNMLP00000021550	annotation not available (112 aa)
	ENSNMLP00000019585	annotation not available (956 aa)
	MAFB	MAF bZIP transcription factor B. (400 aa)
	ENSNMLP00000044207	Mindbomb E3 ubiquitin protein ligase 1. (1009 aa)
	ENSNMLP00000035743	annotation not available (466 aa)
	ENSNMLP00000035190	Eph receptor A4, like. (970 aa)
	ENSNMLP00000030157	ephrin-B2a. (335 aa)
	SMAD4	SMAD family member 4. (480 aa)
	ENSNMLP00000027695	Si:ch73-40a2.1. (507 aa)
	ENSNMLP00000026872	annotation not available (479 aa)
	ENSNMLP00000021763	Early growth response 2b. (247 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000019585	ENSNMLP00000030157	ENSNMLP00000019585	ENSNMLP00000030157	annotation not available	ephrin-B2a.	0.748
ENSNMLP00000021763	MAFB	ENSNMLP00000021763	ENSNMLP00000017846	Early growth response 2b.	MAF bZIP transcription factor B.	0.497
ENSNMLP00000026872	ENSNMLP00000035743	ENSNMLP00000026872	ENSNMLP00000035743	annotation not available	annotation not available	0.846
ENSNMLP00000026872	SMAD4	ENSNMLP00000026872	ENSNMLP00000028015	annotation not available	SMAD family member 4.	0.838
ENSNMLP00000027695	ENSNMLP00000030157	ENSNMLP00000027695	ENSNMLP00000030157	Si:ch73-40a2.1.	ephrin-B2a.	0.748
ENSNMLP00000030157	ENSNMLP00000019585	ENSNMLP00000030157	ENSNMLP00000019585	ephrin-B2a.	annotation not available	0.748
ENSNMLP00000030157	ENSNMLP00000027695	ENSNMLP00000030157	ENSNMLP00000027695	ephrin-B2a.	Si:ch73-40a2.1.	0.748
ENSNMLP00000030157	ENSNMLP00000035190	ENSNMLP00000030157	ENSNMLP00000035190	ephrin-B2a.	Eph receptor A4, like.	0.748
ENSNMLP00000035190	ENSNMLP00000030157	ENSNMLP00000035190	ENSNMLP00000030157	Eph receptor A4, like.	ephrin-B2a.	0.748
ENSNMLP00000035743	ENSNMLP00000026872	ENSNMLP00000035743	ENSNMLP00000026872	annotation not available	annotation not available	0.846
ENSNMLP00000035743	SMAD4	ENSNMLP00000035743	ENSNMLP00000028015	annotation not available	SMAD family member 4.	0.843
MAFB	ENSNMLP00000021763	ENSNMLP00000017846	ENSNMLP00000021763	MAF bZIP transcription factor B.	Early growth response 2b.	0.497
SMAD4	ENSNMLP00000026872	ENSNMLP00000028015	ENSNMLP00000026872	SMAD family member 4.	annotation not available	0.838
SMAD4	ENSNMLP00000035743	ENSNMLP00000028015	ENSNMLP00000035743	SMAD family member 4.	annotation not available	0.843