(19 nodes) Positive chemotaxis network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000039562	annotation not available (618 aa)
	ENSNMLP00000000246	annotation not available (542 aa)
	ENSNMLP00000003073	annotation not available (229 aa)
	ENSNMLP00000008422	Leucine rich repeat containing 1. (503 aa)
	ENSNMLP00000010799	annotation not available (194 aa)
	ENSNMLP00000012718	Placental growth factor b. (162 aa)
	ENSNMLP00000013393	alkB homolog 1, histone H2A dioxygenase. (350 aa)
	ENSNMLP00000013944	Fibroblast growth factor 7. (188 aa)
	ENSNMLP00000014924	annotation not available (162 aa)
	ENSNMLP00000015421	annotation not available (257 aa)
	ENSNMLP00000016327	annotation not available (173 aa)
	ENSNMLP00000018317	MET proto-oncogene, receptor tyrosine kinase. (1285 aa)
	ENSNMLP00000024323	Vascular endothelial growth factor Ab. (213 aa)
	ENSNMLP00000024377	Scribble planar cell polarity protein. (1541 aa)
	ENSNMLP00000027292	Secretogranin II (chromogranin C), b. (541 aa)
	ENSNMLP00000027812	Lectin, galactoside binding soluble 3a. (310 aa)
	ENSNMLP00000032705	Vascular endothelial growth factor c. (419 aa)
	ENSNMLP00000032769	annotation not available (252 aa)
	ENSNMLP00000033544	Macrophage stimulating 1 receptor a. (1348 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000003073	ENSNMLP00000010799	annotation not available	annotation not available	0.868
ENSNMLP00000003073	ENSNMLP00000012718	annotation not available	Placental growth factor b.	0.869
ENSNMLP00000003073	ENSNMLP00000016327	annotation not available	annotation not available	0.854
ENSNMLP00000003073	ENSNMLP00000018317	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.865
ENSNMLP00000003073	ENSNMLP00000024323	annotation not available	Vascular endothelial growth factor Ab.	0.858
ENSNMLP00000003073	ENSNMLP00000032705	annotation not available	Vascular endothelial growth factor c.	0.890
ENSNMLP00000003073	ENSNMLP00000032769	annotation not available	annotation not available	0.916
ENSNMLP00000003073	ENSNMLP00000033544	annotation not available	Macrophage stimulating 1 receptor a.	0.844
ENSNMLP00000003073	ENSNMLP00000039562	annotation not available	annotation not available	0.844
ENSNMLP00000008422	ENSNMLP00000018317	Leucine rich repeat containing 1.	MET proto-oncogene, receptor tyrosine kinase.	0.625
ENSNMLP00000008422	ENSNMLP00000033544	Leucine rich repeat containing 1.	Macrophage stimulating 1 receptor a.	0.625
ENSNMLP00000008422	ENSNMLP00000039562	Leucine rich repeat containing 1.	annotation not available	0.625
ENSNMLP00000010799	ENSNMLP00000003073	annotation not available	annotation not available	0.868
ENSNMLP00000010799	ENSNMLP00000012718	annotation not available	Placental growth factor b.	0.814
ENSNMLP00000010799	ENSNMLP00000016327	annotation not available	annotation not available	0.851
ENSNMLP00000010799	ENSNMLP00000018317	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.838
ENSNMLP00000010799	ENSNMLP00000024323	annotation not available	Vascular endothelial growth factor Ab.	0.836
ENSNMLP00000010799	ENSNMLP00000032705	annotation not available	Vascular endothelial growth factor c.	0.843
ENSNMLP00000010799	ENSNMLP00000033544	annotation not available	Macrophage stimulating 1 receptor a.	0.827
ENSNMLP00000010799	ENSNMLP00000039562	annotation not available	annotation not available	0.827