(17 nodes) Glial cell projection network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQP4	Aquaporin 4. (316 aa)
	ENSNMLP00000026254	annotation not available (287 aa)
	ENSNMLP00000023057	Zgc:109889. (322 aa)
	ENSNMLP00000022063	annotation not available (650 aa)
	ENSNMLP00000019053	annotation not available (1259 aa)
	ENSNMLP00000018967	annotation not available (254 aa)
	ENSNMLP00000018964	annotation not available (159 aa)
	ENSNMLP00000018368	WASP family member 3b. (472 aa)
	ENSNMLP00000015528	annotation not available (1353 aa)
	ENSNMLP00000013453	annotation not available (450 aa)
	ENSNMLP00000012745	Solute carrier family 1 member 2b. (559 aa)
	ENSNMLP00000007172	Solute carrier family 7 member 11. (484 aa)
	ENSNMLP00000004096	annotation not available (147 aa)
	ENSNMLP00000003921	annotation not available (666 aa)
	ENSNMLP00000000170	annotation not available (170 aa)
	ENSNMLP00000041041	Sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae). (404 aa)
	ENSNMLP00000029914	PTEN induced kinase 1. (564 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQP4	ENSNMLP00000004096	ENSNMLP00000037871	ENSNMLP00000004096	Aquaporin 4.	annotation not available	0.457
ENSNMLP00000004096	AQP4	ENSNMLP00000004096	ENSNMLP00000037871	annotation not available	Aquaporin 4.	0.457
ENSNMLP00000004096	ENSNMLP00000026254	ENSNMLP00000004096	ENSNMLP00000026254	annotation not available	annotation not available	0.457
ENSNMLP00000013453	ENSNMLP00000018368	ENSNMLP00000013453	ENSNMLP00000018368	annotation not available	WASP family member 3b.	0.839
ENSNMLP00000013453	ENSNMLP00000023057	ENSNMLP00000013453	ENSNMLP00000023057	annotation not available	Zgc:109889.	0.841
ENSNMLP00000018368	ENSNMLP00000013453	ENSNMLP00000018368	ENSNMLP00000013453	WASP family member 3b.	annotation not available	0.839
ENSNMLP00000018368	ENSNMLP00000023057	ENSNMLP00000018368	ENSNMLP00000023057	WASP family member 3b.	Zgc:109889.	0.838
ENSNMLP00000023057	ENSNMLP00000013453	ENSNMLP00000023057	ENSNMLP00000013453	Zgc:109889.	annotation not available	0.841
ENSNMLP00000023057	ENSNMLP00000018368	ENSNMLP00000023057	ENSNMLP00000018368	Zgc:109889.	WASP family member 3b.	0.838
ENSNMLP00000026254	ENSNMLP00000004096	ENSNMLP00000026254	ENSNMLP00000004096	annotation not available	annotation not available	0.457
ENSNMLP00000029914	ENSNMLP00000041041	ENSNMLP00000029914	ENSNMLP00000041041	PTEN induced kinase 1.	Sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae).	0.563
ENSNMLP00000041041	ENSNMLP00000029914	ENSNMLP00000041041	ENSNMLP00000029914	Sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae).	PTEN induced kinase 1.	0.563