(12 nodes) Modification of synaptic structure network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000028298	annotation not available (1045 aa)
	ENSNMLP00000042889	annotation not available (191 aa)
	ENSNMLP00000023057	Zgc:109889. (322 aa)
	ENSNMLP00000021879	Discs, large (Drosophila) homolog-associated protein 3. (456 aa)
	ENSNMLP00000020546	annotation not available (848 aa)
	ENSNMLP00000019805	Cytoplasmic FMR1 interacting protein 1. (1269 aa)
	CDC42	Cell division cycle 42. (191 aa)
	ENSNMLP00000018368	WASP family member 3b. (472 aa)
	ENSNMLP00000014660	BAR/IMD domain containing adaptor protein 2a. (555 aa)
	ENSNMLP00000013529	BAR/IMD domain containing adaptor protein 2b. (471 aa)
	ENSNMLP00000013453	annotation not available (450 aa)
	ENSNMLP00000006385	Filamin A interacting protein 1a. (1183 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSNMLP00000013453	ENSNMLP00000019464	ENSNMLP00000013453	Cell division cycle 42.	annotation not available	0.604
CDC42	ENSNMLP00000013529	ENSNMLP00000019464	ENSNMLP00000013529	Cell division cycle 42.	BAR/IMD domain containing adaptor protein 2b.	0.910
CDC42	ENSNMLP00000014660	ENSNMLP00000019464	ENSNMLP00000014660	Cell division cycle 42.	BAR/IMD domain containing adaptor protein 2a.	0.910
CDC42	ENSNMLP00000018368	ENSNMLP00000019464	ENSNMLP00000018368	Cell division cycle 42.	WASP family member 3b.	0.604
CDC42	ENSNMLP00000019805	ENSNMLP00000019464	ENSNMLP00000019805	Cell division cycle 42.	Cytoplasmic FMR1 interacting protein 1.	0.795
CDC42	ENSNMLP00000023057	ENSNMLP00000019464	ENSNMLP00000023057	Cell division cycle 42.	Zgc:109889.	0.604
ENSNMLP00000013453	CDC42	ENSNMLP00000013453	ENSNMLP00000019464	annotation not available	Cell division cycle 42.	0.604
ENSNMLP00000013453	ENSNMLP00000013529	ENSNMLP00000013453	ENSNMLP00000013529	annotation not available	BAR/IMD domain containing adaptor protein 2b.	0.929
ENSNMLP00000013453	ENSNMLP00000014660	ENSNMLP00000013453	ENSNMLP00000014660	annotation not available	BAR/IMD domain containing adaptor protein 2a.	0.929
ENSNMLP00000013453	ENSNMLP00000018368	ENSNMLP00000013453	ENSNMLP00000018368	annotation not available	WASP family member 3b.	0.839
ENSNMLP00000013453	ENSNMLP00000019805	ENSNMLP00000013453	ENSNMLP00000019805	annotation not available	Cytoplasmic FMR1 interacting protein 1.	0.965
ENSNMLP00000013453	ENSNMLP00000023057	ENSNMLP00000013453	ENSNMLP00000023057	annotation not available	Zgc:109889.	0.841
ENSNMLP00000013453	ENSNMLP00000042889	ENSNMLP00000013453	ENSNMLP00000042889	annotation not available	annotation not available	0.604
ENSNMLP00000013529	CDC42	ENSNMLP00000013529	ENSNMLP00000019464	BAR/IMD domain containing adaptor protein 2b.	Cell division cycle 42.	0.910
ENSNMLP00000013529	ENSNMLP00000013453	ENSNMLP00000013529	ENSNMLP00000013453	BAR/IMD domain containing adaptor protein 2b.	annotation not available	0.929
ENSNMLP00000013529	ENSNMLP00000014660	ENSNMLP00000013529	ENSNMLP00000014660	BAR/IMD domain containing adaptor protein 2b.	BAR/IMD domain containing adaptor protein 2a.	0.838
ENSNMLP00000013529	ENSNMLP00000018368	ENSNMLP00000013529	ENSNMLP00000018368	BAR/IMD domain containing adaptor protein 2b.	WASP family member 3b.	0.929
ENSNMLP00000013529	ENSNMLP00000019805	ENSNMLP00000013529	ENSNMLP00000019805	BAR/IMD domain containing adaptor protein 2b.	Cytoplasmic FMR1 interacting protein 1.	0.863
ENSNMLP00000013529	ENSNMLP00000023057	ENSNMLP00000013529	ENSNMLP00000023057	BAR/IMD domain containing adaptor protein 2b.	Zgc:109889.	0.929
ENSNMLP00000013529	ENSNMLP00000042889	ENSNMLP00000013529	ENSNMLP00000042889	BAR/IMD domain containing adaptor protein 2b.	annotation not available	0.910