(38 nodes) Cell cortex region network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000008495	annotation not available (438 aa)
	ENSNMLP00000045002	G protein signaling modulator 2, like. (617 aa)
	ENSNMLP00000042555	C-terminal binding protein 1. (513 aa)
	UNC13C	Unc-13 homolog C. (1163 aa)
	ENSNMLP00000041114	annotation not available (1141 aa)
	ENSNMLP00000038631	annotation not available (840 aa)
	ENSNMLP00000038629	annotation not available (426 aa)
	ENSNMLP00000036999	Clathrin, light chain A. (232 aa)
	CTBP2	C-terminal binding protein 2. (403 aa)
	ENSNMLP00000035864	annotation not available (428 aa)
	ENSNMLP00000035861	annotation not available (96 aa)
	ENSNMLP00000030320	C-terminal binding protein 2a. (660 aa)
	ENSNMLP00000029902	annotation not available (274 aa)
	ENSNMLP00000026658	annotation not available (1607 aa)
	ENSNMLP00000026187	annotation not available (663 aa)
	ENSNMLP00000025603	annotation not available (1573 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (1301 aa)
	ENSNMLP00000023774	annotation not available (360 aa)
	ENSNMLP00000022526	ELKS/RAB6-interacting/CAST family member 1a. (1121 aa)
	ENSNMLP00000022244	Dynactin 1b. (1212 aa)
	ENSNMLP00000022174	Regulating synaptic membrane exocytosis 3. (307 aa)
	ENSNMLP00000020761	ELKS/RAB6-interacting/CAST family member 2. (966 aa)
	ENSNMLP00000020757	annotation not available (1070 aa)
	ENSNMLP00000020581	Clathrin, light chain B. (200 aa)
	ENSNMLP00000019570	C-terminal binding protein 1. (416 aa)
	ERC2	ELKS/RAB6-interacting/CAST family member 2. (893 aa)
	ENSNMLP00000017851	annotation not available (377 aa)
	ENSNMLP00000017823	annotation not available (1248 aa)
	ENSNMLP00000017069	annotation not available (934 aa)
	ENSNMLP00000012491	annotation not available (239 aa)
	ENSNMLP00000012479	annotation not available (342 aa)
	ENSNMLP00000011878	annotation not available (205 aa)
	ENSNMLP00000011875	annotation not available (101 aa)
	ENSNMLP00000011760	Pleckstrin homology-like domain, family B, member 2a. (968 aa)
	ENSNMLP00000009995	annotation not available (131 aa)
	RIMS1	Regulating synaptic membrane exocytosis 1. (1325 aa)
	ENSNMLP00000007607	annotation not available (304 aa)
	ENSNMLP00000007604	annotation not available (1244 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTBP2	ENSNMLP00000017069	ENSNMLP00000036356	ENSNMLP00000017069	C-terminal binding protein 2.	annotation not available	0.595
CTBP2	ENSNMLP00000019570	ENSNMLP00000036356	ENSNMLP00000019570	C-terminal binding protein 2.	C-terminal binding protein 1.	0.801
CTBP2	ENSNMLP00000020757	ENSNMLP00000036356	ENSNMLP00000020757	C-terminal binding protein 2.	annotation not available	0.595
CTBP2	ENSNMLP00000042555	ENSNMLP00000036356	ENSNMLP00000042555	C-terminal binding protein 2.	C-terminal binding protein 1.	0.812
ENSNMLP00000007604	ENSNMLP00000007607	ENSNMLP00000007604	ENSNMLP00000007607	annotation not available	annotation not available	0.523
ENSNMLP00000007604	ENSNMLP00000017069	ENSNMLP00000007604	ENSNMLP00000017069	annotation not available	annotation not available	0.665
ENSNMLP00000007604	ENSNMLP00000020757	ENSNMLP00000007604	ENSNMLP00000020757	annotation not available	annotation not available	0.663
ENSNMLP00000007604	ENSNMLP00000022174	ENSNMLP00000007604	ENSNMLP00000022174	annotation not available	Regulating synaptic membrane exocytosis 3.	0.594
ENSNMLP00000007604	ENSNMLP00000029902	ENSNMLP00000007604	ENSNMLP00000029902	annotation not available	annotation not available	0.629
ENSNMLP00000007604	ENSNMLP00000038629	ENSNMLP00000007604	ENSNMLP00000038629	annotation not available	annotation not available	0.594
ENSNMLP00000007604	ENSNMLP00000038631	ENSNMLP00000007604	ENSNMLP00000038631	annotation not available	annotation not available	0.594
ENSNMLP00000007604	RIMS1	ENSNMLP00000007604	ENSNMLP00000009104	annotation not available	Regulating synaptic membrane exocytosis 1.	0.594
ENSNMLP00000007604	RIMS2	ENSNMLP00000007604	ENSNMLP00000023816	annotation not available	Regulating synaptic membrane exocytosis 2.	0.631
ENSNMLP00000007607	ENSNMLP00000007604	ENSNMLP00000007607	ENSNMLP00000007604	annotation not available	annotation not available	0.523
ENSNMLP00000007607	ENSNMLP00000017069	ENSNMLP00000007607	ENSNMLP00000017069	annotation not available	annotation not available	0.658
ENSNMLP00000007607	ENSNMLP00000020757	ENSNMLP00000007607	ENSNMLP00000020757	annotation not available	annotation not available	0.754
ENSNMLP00000007607	ENSNMLP00000022174	ENSNMLP00000007607	ENSNMLP00000022174	annotation not available	Regulating synaptic membrane exocytosis 3.	0.740
ENSNMLP00000007607	ENSNMLP00000029902	ENSNMLP00000007607	ENSNMLP00000029902	annotation not available	annotation not available	0.629
ENSNMLP00000007607	ENSNMLP00000038629	ENSNMLP00000007607	ENSNMLP00000038629	annotation not available	annotation not available	0.740
ENSNMLP00000007607	ENSNMLP00000038631	ENSNMLP00000007607	ENSNMLP00000038631	annotation not available	annotation not available	0.740