(12 nodes) Laminin complex network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000041567	annotation not available (233 aa)
	ENSNMLP00000000580	annotation not available (558 aa)
	PMP22	Peripheral myelin protein 22. (156 aa)
	ENSNMLP00000008119	annotation not available (386 aa)
	ENSNMLP00000013495	Si:ch211-213d14.1. (269 aa)
	ENSNMLP00000013742	Netrin g1a. (521 aa)
	ENSNMLP00000022418	Laminin, beta 2 (laminin S). (1662 aa)
	LAMA2	Laminin subunit alpha 2. (2587 aa)
	NTN4	Netrin 4. (639 aa)
	ENSNMLP00000036895	Vav 3 guanine nucleotide exchange factor b. (493 aa)
	ENSNMLP00000039476	annotation not available (70 aa)
	NTN4-2	Netrin 4. (604 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000000580	ENSNMLP00000013742	ENSNMLP00000000580	ENSNMLP00000013742	annotation not available	Netrin g1a.	0.763
ENSNMLP00000000580	ENSNMLP00000022418	ENSNMLP00000000580	ENSNMLP00000022418	annotation not available	Laminin, beta 2 (laminin S).	0.972
ENSNMLP00000000580	ENSNMLP00000036895	ENSNMLP00000000580	ENSNMLP00000036895	annotation not available	Vav 3 guanine nucleotide exchange factor b.	0.763
ENSNMLP00000000580	ENSNMLP00000039476	ENSNMLP00000000580	ENSNMLP00000039476	annotation not available	annotation not available	0.961
ENSNMLP00000000580	ENSNMLP00000041567	ENSNMLP00000000580	ENSNMLP00000041567	annotation not available	annotation not available	0.959
ENSNMLP00000000580	LAMA2	ENSNMLP00000000580	ENSNMLP00000034412	annotation not available	Laminin subunit alpha 2.	0.611
ENSNMLP00000000580	NTN4	ENSNMLP00000000580	ENSNMLP00000035255	annotation not available	Netrin 4.	0.841
ENSNMLP00000000580	NTN4-2	ENSNMLP00000000580	ENSNMLP00000044942	annotation not available	Netrin 4.	0.841
ENSNMLP00000000580	PMP22	ENSNMLP00000000580	ENSNMLP00000003467	annotation not available	Peripheral myelin protein 22.	0.563
ENSNMLP00000008119	ENSNMLP00000013742	ENSNMLP00000008119	ENSNMLP00000013742	annotation not available	Netrin g1a.	0.763
ENSNMLP00000008119	ENSNMLP00000022418	ENSNMLP00000008119	ENSNMLP00000022418	annotation not available	Laminin, beta 2 (laminin S).	0.972
ENSNMLP00000008119	ENSNMLP00000036895	ENSNMLP00000008119	ENSNMLP00000036895	annotation not available	Vav 3 guanine nucleotide exchange factor b.	0.763
ENSNMLP00000008119	ENSNMLP00000039476	ENSNMLP00000008119	ENSNMLP00000039476	annotation not available	annotation not available	0.961
ENSNMLP00000008119	ENSNMLP00000041567	ENSNMLP00000008119	ENSNMLP00000041567	annotation not available	annotation not available	0.927
ENSNMLP00000008119	LAMA2	ENSNMLP00000008119	ENSNMLP00000034412	annotation not available	Laminin subunit alpha 2.	0.611
ENSNMLP00000008119	NTN4	ENSNMLP00000008119	ENSNMLP00000035255	annotation not available	Netrin 4.	0.841
ENSNMLP00000008119	NTN4-2	ENSNMLP00000008119	ENSNMLP00000044942	annotation not available	Netrin 4.	0.841
ENSNMLP00000008119	PMP22	ENSNMLP00000008119	ENSNMLP00000003467	annotation not available	Peripheral myelin protein 22.	0.563
ENSNMLP00000013742	ENSNMLP00000000580	ENSNMLP00000013742	ENSNMLP00000000580	Netrin g1a.	annotation not available	0.763
ENSNMLP00000013742	ENSNMLP00000008119	ENSNMLP00000013742	ENSNMLP00000008119	Netrin g1a.	annotation not available	0.763