(55 nodes) p53-Independent DNA Damage Response network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000031862	Proteasome 26S subunit, non-ATPase 12. (483 aa)
	ENSNMLP00000031772	Proteasome 20S subunit alpha 6b. (295 aa)
	ENSNMLP00000031380	Proteasome 26S subunit, ATPase 1a. (435 aa)
	ENSNMLP00000031296	Proteasome activator subunit 4b. (1764 aa)
	ENSNMLP00000031222	Proteasome activator subunit 3. (256 aa)
	ENSNMLP00000029703	annotation not available (456 aa)
	ENSNMLP00000029542	annotation not available (657 aa)
	ENSNMLP00000044557	annotation not available (278 aa)
	ENSNMLP00000028836	Proteasome 26S subunit, non-ATPase 9. (210 aa)
	ENSNMLP00000009889	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	ENSNMLP00000008742	Proteasome 26S subunit, ATPase 5. (435 aa)
	ENSNMLP00000008603	Proteasome 20S subunit beta 3. (194 aa)
	ENSNMLP00000008431	Proteasome activator subunit 2. (242 aa)
	ENSNMLP00000008142	annotation not available (256 aa)
	ENSNMLP00000006236	Proteasome 20S subunit alpha 2. (234 aa)
	ENSNMLP00000004475	Proteasome 20S subunit alpha 5. (241 aa)
	ENSNMLP00000004468	Proteasome 26S subunit, non-ATPase 8. (316 aa)
	ENSNMLP00000003767	Proteasome 20S subunit beta 2. (209 aa)
	ENSNMLP00000002858	Proteasome 26S subunit, non-ATPase 7. (330 aa)
	ENSNMLP00000001704	Ubiquitin B. (457 aa)
	ENSNMLP00000001079	Ribosomal protein S27a. (156 aa)
	ENSNMLP00000001049	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	ENSNMLP00000000545	Checkpoint kinase 1. (344 aa)
	ENSNMLP00000027805	Proteasome 20S subunit beta 11b. (271 aa)
	ENSNMLP00000027175	Proteasome 26S subunit, non-ATPase 11b. (441 aa)
	ENSNMLP00000026664	Proteasome 26S subunit, non-ATPase 4b. (373 aa)
	ENSNMLP00000026387	Proteasome 20S subunit beta 4. (265 aa)
	ENSNMLP00000026271	Proteasome 20S subunit alpha 1. (272 aa)
	ENSNMLP00000024664	Proteasome 26S subunit, non-ATPase 10. (228 aa)
	ENSNMLP00000023185	Proteasome inhibitor subunit 1. (272 aa)
	ENSNMLP00000022696	KxDL motif containing 1. (183 aa)
	ENSNMLP00000020626	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	ENSNMLP00000019387	annotation not available (445 aa)
	ENSNMLP00000019318	Proteasome activator subunit 1. (135 aa)
	ENSNMLP00000015704	Proteasome 20S subunit beta 6. (218 aa)
	ENSNMLP00000015677	Proteasome 20S subunit alpha 4. (261 aa)
	ENSNMLP00000015048	Proteasome 20S subunit beta 7. (281 aa)
	ENSNMLP00000014845	Proteasome 26S subunit, ATPase 4. (418 aa)
	ENSNMLP00000011601	Proteasome 26S subunit, ATPase 2. (433 aa)
	ENSNMLP00000011490	Proteasome 20S subunit alpha 3. (133 aa)
	ENSNMLP00000042514	Proteasome 26S subunit, ATPase 3. (496 aa)
	ENSNMLP00000041059	Proteasome 20S subunit alpha 6, like. (309 aa)
	ENSNMLP00000040828	Proteasome activator subunit 4a. (1847 aa)
	ENSNMLP00000040701	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	ENSNMLP00000037864	Proteasome 20S subunit alpha 8. (251 aa)
	ENSNMLP00000036379	annotation not available (285 aa)
	ENSNMLP00000036373	Proteasome 26S subunit, non-ATPase 1. (675 aa)
	ENSNMLP00000034268	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	ENSNMLP00000033615	annotation not available (270 aa)
	ENSNMLP00000033614	Proteasome 20S subunit beta 5. (271 aa)
	ENSNMLP00000032157	Proteasome 20S subunit beta 8A. (276 aa)
	ENSNMLP00000032150	Proteasome 20S subunit beta 8A. (252 aa)
	ENSNMLP00000032145	Proteasome 20S subunit beta 13a. (276 aa)
	ENSNMLP00000032127	Proteasome 20S subunit beta 12. (217 aa)
	ENSNMLP00000032045	Proteasome 20S subunit beta 9a. (216 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000000545	ENSNMLP00000019387	Checkpoint kinase 1.	annotation not available	0.994
ENSNMLP00000000545	ENSNMLP00000029542	Checkpoint kinase 1.	annotation not available	0.993
ENSNMLP00000001049	ENSNMLP00000001079	Proteasome 26S subunit, non-ATPase 4a.	Ribosomal protein S27a.	0.973
ENSNMLP00000001049	ENSNMLP00000001704	Proteasome 26S subunit, non-ATPase 4a.	Ubiquitin B.	0.974
ENSNMLP00000001049	ENSNMLP00000002858	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, non-ATPase 7.	0.998
ENSNMLP00000001049	ENSNMLP00000003767	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit beta 2.	0.992
ENSNMLP00000001049	ENSNMLP00000004468	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, non-ATPase 8.	0.998
ENSNMLP00000001049	ENSNMLP00000004475	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit alpha 5.	0.995
ENSNMLP00000001049	ENSNMLP00000006236	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit alpha 2.	0.995
ENSNMLP00000001049	ENSNMLP00000008142	Proteasome 26S subunit, non-ATPase 4a.	annotation not available	0.971
ENSNMLP00000001049	ENSNMLP00000008431	Proteasome 26S subunit, non-ATPase 4a.	Proteasome activator subunit 2.	0.861
ENSNMLP00000001049	ENSNMLP00000008603	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit beta 3.	0.996
ENSNMLP00000001049	ENSNMLP00000008742	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, ATPase 5.	0.998
ENSNMLP00000001049	ENSNMLP00000009889	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, non-ATPase 14.	0.998
ENSNMLP00000001049	ENSNMLP00000011490	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit alpha 3.	0.994
ENSNMLP00000001049	ENSNMLP00000011601	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, ATPase 2.	0.997
ENSNMLP00000001049	ENSNMLP00000014845	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 26S subunit, ATPase 4.	0.998
ENSNMLP00000001049	ENSNMLP00000015048	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit beta 7.	0.971
ENSNMLP00000001049	ENSNMLP00000015677	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit alpha 4.	0.996
ENSNMLP00000001049	ENSNMLP00000015704	Proteasome 26S subunit, non-ATPase 4a.	Proteasome 20S subunit beta 6.	0.992