(10 nodes) Signal recognition particle receptor beta subunit network (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNMLP00000017428	ADP-ribosylation factor-like 13A. (399 aa)
	ENSNMLP00000043716	ADP-ribosylation factor-like 15a. (186 aa)
	ENSNMLP00000039161	Ras-related GTP binding Ca. (369 aa)
	ENSNMLP00000037763	RAB, member of RAS oncogene family-like 2. (240 aa)
	ENSNMLP00000037616	Ras-related GTP binding D. (417 aa)
	ENSNMLP00000029146	Eukaryotic elongation factor, selenocysteine-tRNA-specific. (549 aa)
	ENSNMLP00000021907	Ras-related GTP binding Cb. (371 aa)
	ENSNMLP00000014330	SRP receptor subunit beta. (274 aa)
	ENSNMLP00000014113	ADP-ribosylation factor-like 8A. (187 aa)
	ENSNMLP00000006559	ADP-ribosylation factor-like 9. (251 aa)

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000006559	ENSNMLP00000017428	ADP-ribosylation factor-like 9.	ADP-ribosylation factor-like 13A.	0.501
ENSNMLP00000006559	ENSNMLP00000037763	ADP-ribosylation factor-like 9.	RAB, member of RAS oncogene family-like 2.	0.507
ENSNMLP00000014113	ENSNMLP00000017428	ADP-ribosylation factor-like 8A.	ADP-ribosylation factor-like 13A.	0.474
ENSNMLP00000017428	ENSNMLP00000006559	ADP-ribosylation factor-like 13A.	ADP-ribosylation factor-like 9.	0.501
ENSNMLP00000017428	ENSNMLP00000014113	ADP-ribosylation factor-like 13A.	ADP-ribosylation factor-like 8A.	0.474
ENSNMLP00000017428	ENSNMLP00000037763	ADP-ribosylation factor-like 13A.	RAB, member of RAS oncogene family-like 2.	0.494
ENSNMLP00000017428	ENSNMLP00000043716	ADP-ribosylation factor-like 13A.	ADP-ribosylation factor-like 15a.	0.626
ENSNMLP00000021907	ENSNMLP00000037616	Ras-related GTP binding Cb.	Ras-related GTP binding D.	0.838
ENSNMLP00000021907	ENSNMLP00000039161	Ras-related GTP binding Cb.	Ras-related GTP binding Ca.	0.837
ENSNMLP00000037616	ENSNMLP00000021907	Ras-related GTP binding D.	Ras-related GTP binding Cb.	0.838
ENSNMLP00000037616	ENSNMLP00000039161	Ras-related GTP binding D.	Ras-related GTP binding Ca.	0.838
ENSNMLP00000037763	ENSNMLP00000006559	RAB, member of RAS oncogene family-like 2.	ADP-ribosylation factor-like 9.	0.507
ENSNMLP00000037763	ENSNMLP00000017428	RAB, member of RAS oncogene family-like 2.	ADP-ribosylation factor-like 13A.	0.494
ENSNMLP00000039161	ENSNMLP00000021907	Ras-related GTP binding Ca.	Ras-related GTP binding Cb.	0.837
ENSNMLP00000039161	ENSNMLP00000037616	Ras-related GTP binding Ca.	Ras-related GTP binding D.	0.838
ENSNMLP00000043716	ENSNMLP00000017428	ADP-ribosylation factor-like 15a.	ADP-ribosylation factor-like 13A.	0.626