(107 nodes) Mixed, incl. TonB-dependent receptor-like, beta-barrel domain superfamily, and TonB, C-terminal network (Granulicella pectinivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFR97252.1	Yip1 domain-containing protein. (244 aa)
	SFR97276.1	Import receptor subunit TOM20. (274 aa)
	SFR97361.1	LPS-assembly protein. (847 aa)
	SFR97487.1	Carboxypeptidase regulatory-like domain-containing protein; Manually curated. (1091 aa)
	SFR98136.1	Carboxypeptidase regulatory-like domain-containing protein. (1152 aa)
	SFR98161.1	Carboxypeptidase regulatory-like domain-containing protein. (1155 aa)
	SFR98232.1	Carboxypeptidase regulatory-like domain-containing protein. (1114 aa)
	SFR98284.1	Carboxypeptidase regulatory-like domain-containing protein. (1144 aa)
	SFR98401.1	TonB-dependent Receptor Plug Domain. (1175 aa)
	SFR98532.1	Carboxypeptidase regulatory-like domain-containing protein. (1106 aa)
	SFR98712.1	TonB-dependent Receptor Plug Domain. (1158 aa)
	SFR98852.1	TonB family C-terminal domain-containing protein. (272 aa)
	SFR98949.1	VWFA-related domain-containing protein. (351 aa)
	SFR99184.1	ATP10 protein. (169 aa)
	SFS00184.1	TonB-dependent Receptor Plug Domain. (892 aa)
	SFS01083.1	TonB-dependent Receptor Plug Domain. (1087 aa)
	SFS01250.1	Carboxypeptidase regulatory-like domain-containing protein. (1120 aa)
	SFS01309.1	TonB-dependent Receptor Plug Domain. (1159 aa)
	SFS01369.1	Carboxypeptidase regulatory-like domain-containing protein. (1091 aa)
	SFS01399.1	Hypothetical protein. (424 aa)
	SFS01411.1	Carboxypeptidase regulatory-like domain-containing protein. (1162 aa)
	SFS01681.1	Outer membrane transport energization protein TonB. (247 aa)
	SFS03001.1	Uncharacterized conserved protein. (393 aa)
	SFS03396.1	Carboxypeptidase regulatory-like domain-containing protein. (1178 aa)
	SFS03436.1	Carboxypeptidase regulatory-like domain-containing protein. (1122 aa)
	SFS03446.1	Carboxypeptidase regulatory-like domain-containing protein. (1073 aa)
	SFS03528.1	Iron complex outermembrane recepter protein. (927 aa)
	SFS04921.1	Hypothetical protein. (445 aa)
	SFS04926.1	Carboxypeptidase regulatory-like domain-containing protein. (1205 aa)
	SFS04978.1	TonB-dependent Receptor Plug Domain; Manually curated. (1138 aa)
	SFS05168.1	Uncharacterized Fe-S cluster-containing enzyme, radical SAM superfamily. (712 aa)
	SFS05380.1	TonB family C-terminal domain-containing protein. (139 aa)
	SFS06178.1	VWFA-related domain-containing protein. (322 aa)
	SFS06341.1	TonB-dependent Receptor Plug Domain. (1107 aa)
	SFS07020.1	Carboxypeptidase regulatory-like domain-containing protein. (1173 aa)
	SFS07238.1	Carboxypeptidase regulatory-like domain-containing protein. (1091 aa)
	SFS07516.1	Carboxypeptidase regulatory-like domain-containing protein. (1094 aa)
	SFS09073.1	TonB-dependent Receptor Plug Domain. (1087 aa)
	SFS09092.1	TonB family C-terminal domain-containing protein. (453 aa)
	SFS09157.1	Sugar phosphate isomerase/epimerase. (285 aa)
	SFS09336.1	TonB-dependent Receptor Plug Domain. (1144 aa)
	SFS09403.1	Carboxypeptidase regulatory-like domain-containing protein. (1187 aa)
	SFS09410.1	Hypothetical protein; Manually curated. (421 aa)
	SFS09416.1	Carboxypeptidase regulatory-like domain-containing protein. (1089 aa)
	SFS10265.1	Uncharacterized protein. (691 aa)
	SFS10676.1	Outer membrane lipoprotein LptE/RlpB (LPS assembly). (177 aa)
	SFS10999.1	Transcriptional regulatory protein, C terminal. (427 aa)
	SFS11011.1	Carboxypeptidase regulatory-like domain-containing protein. (1185 aa)
	SFS11026.1	Carboxypeptidase regulatory-like domain-containing protein. (1198 aa)
	SFS11133.1	Carboxypeptidase regulatory-like domain-containing protein. (1235 aa)
	SFS11158.1	Carboxypeptidase regulatory-like domain-containing protein. (955 aa)
	SFS11538.1	Hypothetical protein. (242 aa)
	SFS11550.1	Osmotically-inducible protein OsmY, contains BON domain. (254 aa)
	SFS11621.1	Ca-activated chloride channel family protein. (350 aa)
	SFS12391.1	Carboxypeptidase regulatory-like domain-containing protein. (1174 aa)
	SFS12429.1	Hypothetical protein. (461 aa)
	SFS12434.1	Carboxypeptidase regulatory-like domain-containing protein. (1138 aa)
	SFS12731.1	TonB-dependent Receptor Plug Domain. (1238 aa)
	SFS12969.1	Carboxypeptidase regulatory-like domain-containing protein. (1219 aa)
	SFS13539.1	nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. (305 aa)
	SFS13678.1	TonB-dependent Receptor Plug Domain. (1194 aa)
	SFS13702.1	Carboxypeptidase regulatory-like domain-containing protein. (1068 aa)
	SFS13731.1	TonB-dependent Receptor Plug Domain. (1197 aa)
	SFS13740.1	Hypothetical protein; Manually curated. (440 aa)
	SFS13763.1	Carboxypeptidase regulatory-like domain-containing protein. (1086 aa)
	SFS13831.1	AhpC/TSA family protein. (483 aa)
	SFS14210.1	Hypothetical protein. (736 aa)
	SFS14222.1	SpoIVB peptidase S55. (594 aa)
	SFS14227.1	VWFA-related domain-containing protein. (398 aa)
	SFS15066.1	Protein TonB. (240 aa)
	SFS15530.1	BON domain-containing protein. (472 aa)
	SFS15566.1	Tetratricopeptide repeat-containing protein. (663 aa)
	SFS15742.1	Type IV pilus assembly protein PilA. (175 aa)
	SFS16033.1	TonB protein C-terminal. (140 aa)
	SFS16383.1	Adenylate cyclase, class 2. (202 aa)
	SFS16420.1	Protein TonB. (324 aa)
	SFS16994.1	GWxTD domain-containing protein. (665 aa)
	SFS17137.1	Outer membrane protein TolC. (703 aa)
	SFS17305.1	Type II secretion system (T2SS), protein E, N-terminal domain. (303 aa)
	SFS17728.1	TonB family C-terminal domain-containing protein. (273 aa)
	SFS18030.1	TonB-dependent Receptor Plug Domain. (1122 aa)
	SFS18033.1	Hypothetical protein. (428 aa)
	SFS18233.1	Carboxypeptidase regulatory-like domain-containing protein. (1098 aa)
	SFS18240.1	Carboxypeptidase regulatory-like domain-containing protein. (1139 aa)
	SFS18245.1	Hypothetical protein. (451 aa)
	SFS18762.1	Hypothetical protein. (407 aa)
	SFS18861.1	Carboxypeptidase regulatory-like domain-containing protein. (1114 aa)
	SFS18921.1	Carboxypeptidase regulatory-like domain-containing protein. (1154 aa)
	SFS18975.1	Carboxypeptidase regulatory-like domain-containing protein. (856 aa)
	SFS20443.1	Carboxypeptidase regulatory-like domain-containing protein. (1266 aa)
	SFS20543.1	Carboxypeptidase regulatory-like domain-containing protein. (1099 aa)
	SFS20699.1	VWFA-related domain-containing protein. (364 aa)
	SFS20701.1	Ca-activated chloride channel family protein. (345 aa)
	SFS20717.1	Membrane protein DedA, SNARE-associated domain. (238 aa)
	SFS20726.1	Hypothetical protein. (1205 aa)
	SFS20752.1	Hypothetical protein. (361 aa)
	SFS20810.1	Acetyltransferase (GNAT) family protein. (330 aa)
	SFS20892.1	Carboxypeptidase regulatory-like domain-containing protein. (1074 aa)
	SFS20977.1	Outer membrane receptor proteins, mostly Fe transport. (957 aa)
	SFS20994.1	Carboxypeptidase regulatory-like domain-containing protein. (987 aa)
	SFS21104.1	Carboxypeptidase regulatory-like domain-containing protein. (1220 aa)
	SFS21113.1	Carboxypeptidase regulatory-like domain-containing protein. (1114 aa)
	SFS21127.1	TonB family C-terminal domain-containing protein. (133 aa)
	SFS21150.1	VWFA-related domain-containing protein. (390 aa)
	SFS21265.1	Tetratricopeptide repeat-containing protein. (534 aa)
	SFS21399.1	BON domain-containing protein. (368 aa)
	SFS21739.1	TonB family C-terminal domain-containing protein. (344 aa)

Your Current Organism:

Granulicella pectinivorans

NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFR97252.1	SFR97276.1	SAMN05421771_0109	SAMN05421771_0112	Yip1 domain-containing protein.	Import receptor subunit TOM20.	0.774
SFR97252.1	SFR97361.1	SAMN05421771_0109	SAMN05421771_0122	Yip1 domain-containing protein.	LPS-assembly protein.	0.610
SFR97252.1	SFR98136.1	SAMN05421771_0109	SAMN05421771_0222	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.588
SFR97252.1	SFR98232.1	SAMN05421771_0109	SAMN05421771_0233	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.472
SFR97252.1	SFR98284.1	SAMN05421771_0109	SAMN05421771_0239	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.508
SFR97252.1	SFR98401.1	SAMN05421771_0109	SAMN05421771_0252	Yip1 domain-containing protein.	TonB-dependent Receptor Plug Domain.	0.415
SFR97252.1	SFR98532.1	SAMN05421771_0109	SAMN05421771_0268	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.486
SFR97252.1	SFR98712.1	SAMN05421771_0109	SAMN05421771_0292	Yip1 domain-containing protein.	TonB-dependent Receptor Plug Domain.	0.649
SFR97252.1	SFR98949.1	SAMN05421771_0109	SAMN05421771_0321	Yip1 domain-containing protein.	VWFA-related domain-containing protein.	0.754
SFR97252.1	SFS01083.1	SAMN05421771_0109	SAMN05421771_0542	Yip1 domain-containing protein.	TonB-dependent Receptor Plug Domain.	0.590
SFR97252.1	SFS01369.1	SAMN05421771_0109	SAMN05421771_0570	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.427
SFR97252.1	SFS01681.1	SAMN05421771_0109	SAMN05421771_0604	Yip1 domain-containing protein.	Outer membrane transport energization protein TonB.	0.557
SFR97252.1	SFS03001.1	SAMN05421771_0109	SAMN05421771_0732	Yip1 domain-containing protein.	Uncharacterized conserved protein.	0.709
SFR97252.1	SFS03436.1	SAMN05421771_0109	SAMN05421771_0777	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.733
SFR97252.1	SFS03446.1	SAMN05421771_0109	SAMN05421771_0778	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.726
SFR97252.1	SFS03528.1	SAMN05421771_0109	SAMN05421771_0786	Yip1 domain-containing protein.	Iron complex outermembrane recepter protein.	0.647
SFR97252.1	SFS04926.1	SAMN05421771_0109	SAMN05421771_1002	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.407
SFR97252.1	SFS04978.1	SAMN05421771_0109	SAMN05421771_1011	Yip1 domain-containing protein.	TonB-dependent Receptor Plug Domain; Manually curated.	0.494
SFR97252.1	SFS06178.1	SAMN05421771_0109	SAMN05421771_1175	Yip1 domain-containing protein.	VWFA-related domain-containing protein.	0.719
SFR97252.1	SFS07238.1	SAMN05421771_0109	SAMN05421771_1309	Yip1 domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.674

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