STRINGSTRING
SFR98232.1 SFR98232.1 SFR98401.1 SFR98401.1 SFS01250.1 SFS01250.1 SFS01309.1 SFS01309.1 SFS01681.1 SFS01681.1 SFS05168.1 SFS05168.1 SFS05380.1 SFS05380.1 SFS06178.1 SFS06178.1 SFS07020.1 SFS07020.1 SFS07516.1 SFS07516.1 SFS11158.1 SFS11158.1 SFS15066.1 SFS15066.1 SFS16033.1 SFS16033.1 SFS16383.1 SFS16383.1 SFS17728.1 SFS17728.1 SFS18233.1 SFS18233.1 SFS20701.1 SFS20701.1 SFS20752.1 SFS20752.1 SFS20977.1 SFS20977.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFR98232.1Carboxypeptidase regulatory-like domain-containing protein. (1114 aa)
SFR98401.1TonB-dependent Receptor Plug Domain. (1175 aa)
SFS01250.1Carboxypeptidase regulatory-like domain-containing protein. (1120 aa)
SFS01309.1TonB-dependent Receptor Plug Domain. (1159 aa)
SFS01681.1Outer membrane transport energization protein TonB. (247 aa)
SFS05168.1Uncharacterized Fe-S cluster-containing enzyme, radical SAM superfamily. (712 aa)
SFS05380.1TonB family C-terminal domain-containing protein. (139 aa)
SFS06178.1VWFA-related domain-containing protein. (322 aa)
SFS07020.1Carboxypeptidase regulatory-like domain-containing protein. (1173 aa)
SFS07516.1Carboxypeptidase regulatory-like domain-containing protein. (1094 aa)
SFS11158.1Carboxypeptidase regulatory-like domain-containing protein. (955 aa)
SFS15066.1Protein TonB. (240 aa)
SFS16033.1TonB protein C-terminal. (140 aa)
SFS16383.1Adenylate cyclase, class 2. (202 aa)
SFS17728.1TonB family C-terminal domain-containing protein. (273 aa)
SFS18233.1Carboxypeptidase regulatory-like domain-containing protein. (1098 aa)
SFS20701.1Ca-activated chloride channel family protein. (345 aa)
SFS20752.1Hypothetical protein. (361 aa)
SFS20977.1Outer membrane receptor proteins, mostly Fe transport. (957 aa)
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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