(12 nodes) Mixed, incl. Von Willebrand factor, type A, and GWxTD domain network (Granulicella pectinivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFR97276.1	Import receptor subunit TOM20. (274 aa)
	SFR98949.1	VWFA-related domain-containing protein. (351 aa)
	SFS03001.1	Uncharacterized conserved protein. (393 aa)
	SFS13731.1	TonB-dependent Receptor Plug Domain. (1197 aa)
	SFS14227.1	VWFA-related domain-containing protein. (398 aa)
	SFS15566.1	Tetratricopeptide repeat-containing protein. (663 aa)
	SFS16994.1	GWxTD domain-containing protein. (665 aa)
	SFS18240.1	Carboxypeptidase regulatory-like domain-containing protein. (1139 aa)
	SFS18762.1	Hypothetical protein. (407 aa)
	SFS20994.1	Carboxypeptidase regulatory-like domain-containing protein. (987 aa)
	SFS21265.1	Tetratricopeptide repeat-containing protein. (534 aa)
	SFS21399.1	BON domain-containing protein. (368 aa)

Your Current Organism:

Granulicella pectinivorans

NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFR97276.1	SFR98949.1	SAMN05421771_0112	SAMN05421771_0321	Import receptor subunit TOM20.	VWFA-related domain-containing protein.	0.768
SFR97276.1	SFS03001.1	SAMN05421771_0112	SAMN05421771_0732	Import receptor subunit TOM20.	Uncharacterized conserved protein.	0.757
SFR97276.1	SFS13731.1	SAMN05421771_0112	SAMN05421771_2381	Import receptor subunit TOM20.	TonB-dependent Receptor Plug Domain.	0.742
SFR97276.1	SFS14227.1	SAMN05421771_0112	SAMN05421771_2489	Import receptor subunit TOM20.	VWFA-related domain-containing protein.	0.772
SFR97276.1	SFS15566.1	SAMN05421771_0112	SAMN05421771_2735	Import receptor subunit TOM20.	Tetratricopeptide repeat-containing protein.	0.758
SFR97276.1	SFS16994.1	SAMN05421771_0112	SAMN05421771_3022	Import receptor subunit TOM20.	GWxTD domain-containing protein.	0.785
SFR97276.1	SFS18240.1	SAMN05421771_0112	SAMN05421771_3392	Import receptor subunit TOM20.	Carboxypeptidase regulatory-like domain-containing protein.	0.746
SFR97276.1	SFS18762.1	SAMN05421771_0112	SAMN05421771_3557	Import receptor subunit TOM20.	Hypothetical protein.	0.784
SFR97276.1	SFS20994.1	SAMN05421771_0112	SAMN05421771_3994	Import receptor subunit TOM20.	Carboxypeptidase regulatory-like domain-containing protein.	0.750
SFR97276.1	SFS21265.1	SAMN05421771_0112	SAMN05421771_4117	Import receptor subunit TOM20.	Tetratricopeptide repeat-containing protein.	0.785
SFR97276.1	SFS21399.1	SAMN05421771_0112	SAMN05421771_4177	Import receptor subunit TOM20.	BON domain-containing protein.	0.743
SFR98949.1	SFR97276.1	SAMN05421771_0321	SAMN05421771_0112	VWFA-related domain-containing protein.	Import receptor subunit TOM20.	0.768
SFR98949.1	SFS03001.1	SAMN05421771_0321	SAMN05421771_0732	VWFA-related domain-containing protein.	Uncharacterized conserved protein.	0.773
SFR98949.1	SFS13731.1	SAMN05421771_0321	SAMN05421771_2381	VWFA-related domain-containing protein.	TonB-dependent Receptor Plug Domain.	0.763
SFR98949.1	SFS15566.1	SAMN05421771_0321	SAMN05421771_2735	VWFA-related domain-containing protein.	Tetratricopeptide repeat-containing protein.	0.733
SFR98949.1	SFS16994.1	SAMN05421771_0321	SAMN05421771_3022	VWFA-related domain-containing protein.	GWxTD domain-containing protein.	0.774
SFR98949.1	SFS18240.1	SAMN05421771_0321	SAMN05421771_3392	VWFA-related domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.763
SFR98949.1	SFS18762.1	SAMN05421771_0321	SAMN05421771_3557	VWFA-related domain-containing protein.	Hypothetical protein.	0.763
SFR98949.1	SFS20994.1	SAMN05421771_0321	SAMN05421771_3994	VWFA-related domain-containing protein.	Carboxypeptidase regulatory-like domain-containing protein.	0.773
SFR98949.1	SFS21265.1	SAMN05421771_0321	SAMN05421771_4117	VWFA-related domain-containing protein.	Tetratricopeptide repeat-containing protein.	0.767

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