(10 nodes) Polyketide synthase, ketoreductase domain, and Condensation domain network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP05428.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
	AJP00314.1	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1947 aa)
	AJP00635.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1799 aa)
	AJP00639.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2096 aa)
	AJP00810.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
	AJP03824.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (59 aa)
	AJP03825.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4798 aa)
	AJP03827.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4654 aa)
	AJP04705.1	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2470 aa)
	AJP06017.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2396 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP00314.1	AJP00635.1	TU94_00870	TU94_03030	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00314.1	AJP00639.1	TU94_00870	TU94_03065	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJP00314.1	AJP00810.1	TU94_00870	TU94_04245	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJP00314.1	AJP03824.1	TU94_00870	TU94_22445	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.988
AJP00314.1	AJP03825.1	TU94_00870	TU94_22460	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00314.1	AJP03827.1	TU94_00870	TU94_22470	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AJP00314.1	AJP04705.1	TU94_00870	TU94_27865	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJP00314.1	AJP05428.1	TU94_00870	TU94_00865	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP00314.1	AJP06017.1	TU94_00870	TU94_32375	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP00635.1	AJP00314.1	TU94_03030	TU94_00870	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00635.1	AJP00639.1	TU94_03030	TU94_03065	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AJP00635.1	AJP00810.1	TU94_03030	TU94_04245	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJP00635.1	AJP03824.1	TU94_03030	TU94_22445	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.947
AJP00635.1	AJP03825.1	TU94_03030	TU94_22460	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AJP00635.1	AJP03827.1	TU94_03030	TU94_22470	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AJP00635.1	AJP04705.1	TU94_03030	TU94_27865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJP00635.1	AJP05428.1	TU94_03030	TU94_00865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJP00635.1	AJP06017.1	TU94_03030	TU94_32375	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP00639.1	AJP00314.1	TU94_03065	TU94_00870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJP00639.1	AJP00635.1	TU94_03065	TU94_03030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952